Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00790 ATGGTGAGGTCGGCATGTTATGAAAAAGATAGTGTCAAAATCAAAAGTGGTGTATGGATCGCAGAAGAAGATACAAAGACACCTACATTTGTTCTGGAGCATGGATCTAGTAATTGGACTTCTATCCCCAAAAAAACAGGTGTTAAGAGGTGTGGAAAAAGTTGCAGGCTACGCTGGAATAACTACATGCCTGATCTTAAACATGATAACTTCACGTCCCAAGAAGAAGATCTAATCATTAAGCTTCACGCAGCCATAGGTAGCAGGTGGTCTATAATAGCTCAACAACTTCCTGGGAGAACAGACAATGATGTAAAGAACAATTGGAACACAAAGCTGAAAAAGAAGCTCTCTCAAATGGGGATAGACCCTGTTACCCACAAGCCATTCTCCAAACTCATTGCTGACTATGGAAATATAGGTACTAGTTTCCATAAACCAACTACACAAATCGAGGTTGCCAATAAAGACTTTAGGAATTATGCAATTCTATTAAAATCAGATCCATATCAATTCAACCAACAACAAACATTGCAAACAACAGGAAATAGCAGCTTTATGGTTACCAAAAGTCATAGTGATGATGACTTCTCAATAGTGAAAGGTGACTCAAATTGCACAAACATAAAGAATGAGACCAATCCAACACTAGTGGATGCTTTTCCACCATTTAGTTGGAATGATTTTCTTCTAGAAGATGCTTTTGCACCACCTACTAACAACCAAGAACAACAAATTTTGTTTTCAAAGGAGAATGTAATGAGCCAAAATGGGAAAATGAAAGAGGCCATGTCGCATCAAGTTTCATCATGCTCAGATATTTCATTTGTAGAAGCTATACTTGATCAGGAAAATGAGATGTTTCTAAGCTTTCCTCACCTTTTGGAGGAACCATCTAATTATTGA 906 0.3764 MVRSACYEKDSVKIKSGVWIAEEDTKTPTFVLEHGSSNWTSIPKKTGVKRCGKSCRLRWNNYMPDLKHDNFTSQEEDLIIKLHAAIGSRWSIIAQQLPGRTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGTSFHKPTTQIEVANKDFRNYAILLKSDPYQFNQQQTLQTTGNSSFMVTKSHSDDDFSIVKGDSNCTNIKNETNPTLVDAFPPFSWNDFLLEDAFAPPTNNQEQQILFSKENVMSQNGKMKEAMSHQVSSCSDISFVEAILDQENEMFLSFPHLLEEPSNY 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00790 301 Gene3D - 8 68 - -
Car05g00790 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Car05g00790 301 Pfam Myb-like DNA-binding domain 70 111 IPR001005 -
Car05g00790 301 Pfam Myb-like DNA-binding domain 17 62 IPR001005 -
Car05g00790 301 SMART sant 15 65 IPR001005 -
Car05g00790 301 SMART sant 67 115 IPR001005 -
Car05g00790 301 PANTHER F14D16.11-RELATED 1 301 - -
Car05g00790 301 ProSiteProfiles Myb-like domain profile. 64 113 IPR001005 -
Car05g00790 301 PANTHER F14D16.11-RELATED 1 301 - -
Car05g00790 301 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Car05g00790 301 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Car05g00790 301 CDD SANT 19 63 IPR001005 -
Car05g00790 301 CDD SANT 70 113 IPR001005 -
Car05g00790 301 Gene3D - 70 130 - -
Car05g00790 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00790 Car-Chr5 44058079 44069612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00790 1 297 MYB Transcription Factor Family AT3G28470 41.121 7.40e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car05g00790 Myb_DNA-binding 1.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00790 K09422 - gmx:100795381 325.094