Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00784 ATGGGAAGTTCTTGTACAAAACCAGTTGCTCATGTCTCTTCATCAAATTTTTCTGGAAGTAAGAAACCTCAAAGCACGAGAAAGCGGCATTCAAATTCTTCTGAACATAAAGCTTCTAATTTCCAAACTTCAGAATCAAATTTGGATAAAGCAATCTCCATAAAACTTAAGTCCTTCAGCTTGAATGATCTGAAGGAGGCTACGAAGAACTTCCGGCGAGAAAATTTAATCGGAGAAGGAGGATTTGGGCGTATCTTCAAGGGATGGATCGATGAGAATACATTTGCTCCAACAAAACCAGGAAGTGGAATTGTTGTGGCCATTAAGAATCTCAAGCCAGAAAGCTTTCAAGGTCACAAAGAATGGCTTGCTGAAGTGAATTATCTAGGGCAGCTTTACCATGAAAATCTGGTGAAACTCATTGGTTATTGTTTGGAAGGGAAAAACAGGCTTCTAGTTTATGAGTTCATGCAAAAAGGAAGTTTGGAAAATCATTTATTCAGAAAAAGTGTTCAACCTATTGCATGGGCTACGCGCGTGAGCATTGCTATTGGTGTCGCACGAGGATTAGCATTCTTACATTCCTTGAATGCGAATGTTATCTTTCGTGATTTAAAGGCGTCCAACATTCTACTTGATTCAGATTTCAATGCAAAGCTTTCAGATTTCGGGTTGGCGAGAGATGGTCCTACTGGAGATAATACTCATGTATCAACTAGAATTATTGGAACTCAAGGTTATGCTGCTCCAGAGTATGTTGCTACAGGTCATTTGACTCCAAGGAGTGATGTATACAGCTTCGGCGTTGTGTTGTTAGAGTTACTAACAGGAAAACGTGCGGTAGAAGACGACAGGCCTGGATTTTCCGAAGAGACTCTGGTGGATTGGGCATTGCCATTCCTGAATGATAGTAGAAGAGTTTTGAGAATCATGGACACAAGATTAGGTGGTCAATATTCAAAGAAAGGAGCACAAGGGGCAGCAGCACTTGCATTGCAATGCCTAAACTCTGATCCTAAATTTAGACCACCTATGGTTGAAGTTCTTGCATCACTGGAAGGACTTCAATCATCAAATAATACATTCCCTAGGGTACCAAAATATGGAAATGAGAGTCCTGCCACAAAGCATTCTTCTCATTCCCTAAGATAA 1152 0.4045 MGSSCTKPVAHVSSSNFSGSKKPQSTRKRHSNSSEHKASNFQTSESNLDKAISIKLKSFSLNDLKEATKNFRRENLIGEGGFGRIFKGWIDENTFAPTKPGSGIVVAIKNLKPESFQGHKEWLAEVNYLGQLYHENLVKLIGYCLEGKNRLLVYEFMQKGSLENHLFRKSVQPIAWATRVSIAIGVARGLAFLHSLNANVIFRDLKASNILLDSDFNAKLSDFGLARDGPTGDNTHVSTRIIGTQGYAAPEYVATGHLTPRSDVYSFGVVLLELLTGKRAVEDDRPGFSEETLVDWALPFLNDSRRVLRIMDTRLGGQYSKKGAQGAAALALQCLNSDPKFRPPMVEVLASLEGLQSSNNTFPRVPKYGNESPATKHSSHSLR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00784 383 MobiDBLite consensus disorder prediction 360 383 - -
Car05g00784 383 SUPERFAMILY Protein kinase-like (PK-like) 49 353 IPR011009 -
Car05g00784 383 MobiDBLite consensus disorder prediction 1 22 - -
Car05g00784 383 Gene3D Transferase(Phosphotransferase) domain 1 157 368 - -
Car05g00784 383 SMART serkin_6 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00784 383 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 380 - -
Car05g00784 383 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00784 383 Pfam Protein tyrosine and serine/threonine kinase 74 351 IPR001245 GO:0004672|GO:0006468
Car05g00784 383 Gene3D Phosphorylase Kinase; domain 1 28 156 - -
Car05g00784 383 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Car05g00784 383 PANTHER OS01G0588500 PROTEIN-RELATED 17 380 - -
Car05g00784 383 CDD STKc_IRAK 77 355 - -
Car05g00784 383 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00784 Car-Chr5 43503460 43507347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00784 37 379 Glycoside Hydrolase AT3G07070 46.552 2.68e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Car05g00784 PK_Tyr_Ser-Thr 6.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00784 - - gmx:100800654 622.854