Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00770 ATGCAATCCCTCAAGTCACGCTCTCTCCTTTTTTATTCTCCTTTCAATTACTCACTTCATCCCTTTCTCTTTTCATTTTCTACTGCTTCTTTATCAACCCCAAATCAAACCACTATTCTCCACGATTTCCTCAATTCCAATTTCAATTTCCCCAAATCTCAATCCCTTTATATCTCTAAACGCATTTCATCTCACACCCTCCCTCTAAAGCCCTTATCCGTCCTCAACTTTTTCAAACAAATTGGATTCTCCGAATCTCAGATTCACTCTATTATTCGTCAGAGAGCTCAAATACTCTTCTCAGATGTTGATAAAACTCTAAAACCTAAAATTCACCTCTTTCAACAATTGGGTTTCCAATGTTCGGATTTATGCGATTTCATTTCCAAAAATCCCACCATTTTGACTGCTAGTTTGAACAAAACATTGGTACCCTCCGTCGAAGCCATTCGAAAAATTGTTTGCAACGAAAAAGATCTTATTCATGTTTTGTGCAAATGTGGTTGGATACTCCCAAAGTACCAACTTTTTGTCGCCAACGCCGCTTTCCTAGAGAGATGGGGAATTTTTGGTGATCAGCTTTTGATTCTACTCAAACGACAGTCGAGACTTTTGACTGCCACACAATCTTCTATTAGGAACTATGTTTTGCAAGCTGTAGACTTGGGTTTCGAAGAAAATTCAAGAATGTTGGTTCACGGGCTTCATACCTTAGCTTGTTTGAGTTCTAAAACATTTAGGAGGAAGATGGATTTCATTCAGGGTTTTGGGTTTTCTAAAGATGAGTGTTTGCAAATGTTTAAAAAGACTCCAACTTTGCTTAGGACATCGGAGAAGAAATTAAAGGTTGGAATGGAATTCTTCTTGCAGACAGTAATGCTGCCAAAGTCAGCGTTGGTTCAACGGCCTGTGATTTTGATGTATAGCATTGAGGATCGAGTGTTTCCTCGGTATAGAGTTTTTCAGCTTTTGAAAGCACAAAATCTATGTAGGAAGGAAGCATTGAGCAATTTTGGGGATCACAGCTTTGTTGCTGCAGATATGAGTCCATTAATTGTCAACTTGAGCAATGACTTCCAAATTGAAAATCTTGAAATTCTGCAAAATGAAAATGTTGAAGCGGGAAATATAGTTGGGGTTGCAAGTGATGAGGTAAAATCAGAAAGAGACATGGTTGAAATTATGGAGTCAACTGATGACATTGTAGGCGAAAAATGCGAAGGAGCTTCTGAAATAGTAGTTAGTAATTCAGTTTTCTTGGATCATGAAGTTGGTGATGGAGATGAAGTAAACTCGTCTATAATCTCAAACGAGGCTCAGGAAGAATCTGCACATGAGGTACAGTTCACGACTTGTAGAGATGTCGAGGTTTTGCAGGAAAAGGAAGACATGAATGTTATTGATCCACTTCATGTGCATGATGATACACTTGATGTTGCCAAGGTAACAAACTGGAGTGGAACTCACCAGCAATATCCTGCAAACATCAAGAGAGAAAAAGGAAGTTGA 1509 0.3863 MQSLKSRSLLFYSPFNYSLHPFLFSFSTASLSTPNQTTILHDFLNSNFNFPKSQSLYISKRISSHTLPLKPLSVLNFFKQIGFSESQIHSIIRQRAQILFSDVDKTLKPKIHLFQQLGFQCSDLCDFISKNPTILTASLNKTLVPSVEAIRKIVCNEKDLIHVLCKCGWILPKYQLFVANAAFLERWGIFGDQLLILLKRQSRLLTATQSSIRNYVLQAVDLGFEENSRMLVHGLHTLACLSSKTFRRKMDFIQGFGFSKDECLQMFKKTPTLLRTSEKKLKVGMEFFLQTVMLPKSALVQRPVILMYSIEDRVFPRYRVFQLLKAQNLCRKEALSNFGDHSFVAADMSPLIVNLSNDFQIENLEILQNENVEAGNIVGVASDEVKSERDMVEIMESTDDIVGEKCEGASEIVVSNSVFLDHEVGDGDEVNSSIISNEAQEESAHEVQFTTCRDVEVLQEKEDMNVIDPLHVHDDTLDVAKVTNWSGTHQQYPANIKREKGS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00770 502 Gene3D Transcription termination factor 3, mitochondrial 177 346 IPR038538 -
Car05g00770 502 PANTHER EMB|CAB62602.1 27 337 - -
Car05g00770 502 PANTHER CGI-12 PROTEIN-RELATED 27 337 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 Pfam mTERF 141 254 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 Pfam mTERF 75 167 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 Pfam mTERF 241 331 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 SMART mt_12 296 327 IPR003690 GO:0003690|GO:0006355
Car05g00770 502 SMART mt_12 229 259 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00770 Car-Chr5 42984771 42987459 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car05g00770 mTERF 6.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00770 K15032 - qsu:111994264 282.337