Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00759 ATGTTGTATTTGTATCAAAAAGCTTTGGGTTTGGCTCTAGAAGGATCACAATTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCATTGATGGGCAAGAATTCTTCGCCGCATATGATGAAGTCCATGATAGCTTTGATGCAATGGGACTGCAAGAAAACCTTATGCGAGACATATATGCTTACGATTTTGAGAGGCCTTCTACAATACAACAAAGAGGAATTGTTCCTTTCTGCAACGGTCTGGATGTGATTCAACAGGCTCAGTCAGGAACTGGGAAGACAACAACATTTTGTTCTAGAATTTTGCAGCagctctaa 330 0.3879 MLYLYQKALGLALEGSQFDANHYDTKMNELLAIDGQEFFAAYDEVHDSFDAMGLQENLMRDIYAYDFERPSTIQQRGIVPFCNGLDVIQQAQSGTGKTTTFCSRILQQL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00759 109 PANTHER - 13 109 - -
Car05g00759 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 108 IPR027417 -
Car05g00759 109 Gene3D - 32 109 IPR027417 -
Car05g00759 109 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 13 109 - -
Car05g00759 109 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 47 75 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00759 Car-Chr5 42578432 42578761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00759 10 109 Eukaryotic Initiation Factors Gene Family AT3G13920 74.257 1.34e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00759 K03257 - cam:105852033 200.29