Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00755 ATGGGCATGGATTACTACAACATACTAAAAGTGAATCGAAACGCGAGCGACGAAGATTTAAAAAAAGCATACAAAAGACTCGCAATGATATGGCACCCAGACAAAAACCCCGTCAACAAAAGCGAAGCAGAAGCCAAATTCAAACGCATTTCCGAAGCCTTCGATGTTTTAAGCGATCCACAGAAACGTAAGATCTACGATTCATACGGTGAAGAAGCACTTAAAAGTGGTCAGTTTCCACCACCTCACCAttcttcatcatcttcttcttcctcttcGCGGACAAATCATAATAAACACCGTCAGAATACTACCAGTACGTTTCATTTTAGTCCTCGCGATGCCGACGCTATGTATGCTGAGATGTTTGGTGCTGATGGTCCGGAAATTGGGGGTTCTCGTAGGGATGGCTTTTTTAGGACATCGAATGGGGTGCCTTTTGGTGGACAGGCGAGGAAAGATGCTGCTGTTGAGATGGCTTTGCCTTGTAGTTTGGAAGAACTTTATAAAGGAGCTCATAAGAAGATGAAGATCTCTAGGACTATTACTGATTTTTTTGGGAAGAGTCGGAATGTGGAGGAGATTGTGACTATTGACGTAAAACCTGGCTGGAAGAAAGGAACAAAGGTTACCTTCCCAGAGAAAGGTAACCAGGAGCATGGCGTCATTCCAGCGGACGTTATCTTTGTAATAGATGAGAAACCACATGCTCTGTATAGAAGGGATGGTAATGATTTGGTGATCAACCAAGAGATAACTCTTGTTGAGGCTCTTACAGGTAAAACCTTGGAACTCACAACCTTAGATGGAAGGAATCTCATGGTCCCATTGACAGATATAGTCACGCCTGGCGCTGAAATTGTTGTCCCTGATGAAGGAATGCCTATTTCAAAAGAGCGTGGCAGGAAAGGAAATATGAAAATTAAGCTTGACATCAAGTATCCTTCGAGGCTGACTCCACAGCAGAAATCTGATCTGAGAAGAGTCTTAAGTTGA 996 0.4217 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPVNKSEAEAKFKRISEAFDVLSDPQKRKIYDSYGEEALKSGQFPPPHHSSSSSSSSSRTNHNKHRQNTTSTFHFSPRDADAMYAEMFGADGPEIGGSRRDGFFRTSNGVPFGGQARKDAAVEMALPCSLEELYKGAHKKMKISRTITDFFGKSRNVEEIVTIDVKPGWKKGTKVTFPEKGNQEHGVIPADVIFVIDEKPHALYRRDGNDLVINQEITLVEALTGKTLELTTLDGRNLMVPLTDIVTPGAEIVVPDEGMPISKERGRKGNMKIKLDIKYPSRLTPQQKSDLRRVLS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00755 331 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Car05g00755 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 158 236 IPR008971 GO:0006457|GO:0051082
Car05g00755 331 PRINTS DnaJ domain signature 6 24 IPR001623 -
Car05g00755 331 PRINTS DnaJ domain signature 24 39 IPR001623 -
Car05g00755 331 PRINTS DnaJ domain signature 42 62 IPR001623 -
Car05g00755 331 PRINTS DnaJ domain signature 62 81 IPR001623 -
Car05g00755 331 MobiDBLite consensus disorder prediction 73 109 - -
Car05g00755 331 CDD DnaJ 4 59 IPR001623 -
Car05g00755 331 Pfam DnaJ domain 4 67 IPR001623 -
Car05g00755 331 PANTHER BNAA06G20720D PROTEIN 2 330 - -
Car05g00755 331 MobiDBLite consensus disorder prediction 80 109 - -
Car05g00755 331 Gene3D - 235 331 - -
Car05g00755 331 Gene3D DnaJ domain 2 133 IPR036869 -
Car05g00755 331 Pfam DnaJ C terminal domain 157 315 IPR002939 -
Car05g00755 331 CDD DnaJ_C 157 318 - -
Car05g00755 331 Gene3D - 155 234 - -
Car05g00755 331 SUPERFAMILY Chaperone J-domain 3 85 IPR036869 -
Car05g00755 331 SUPERFAMILY HSP40/DnaJ peptide-binding domain 239 324 IPR008971 GO:0006457|GO:0051082
Car05g00755 331 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 330 - -
Car05g00755 331 SMART dnaj_3 3 62 IPR001623 -
Car05g00755 331 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00755 Car-Chr5 42447982 42452098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00755 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 2.41e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00755 K09510 - gmx:100819472 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00755 05 42447982 42452098 Car05g00755 05 42447982 42452098 ECH