Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00753 ATGAGAAATGGAAACAGAGCCAACGAACCTGCAAGCTTCTGGACTCAAGCAAACGCGCTTCTTAGGAAGAACTTAACCTTCCAGAAACGAAATGTGAATACAAACATAAGGTTGATATTGATCCCGTTCGGGCTGTGTATATTGATGGTTCTACTTCAAAAGTTGCTCAATAATCAATTTGATAAGGCCAAATATAAGTGTGGATGCATTTGTACCAAGACACAAGGGGAACAGTGTCTGGAGAAAGCGTGTGGGGTTCAATATTCGGATTTTGATCAAGTTGGTGCTTGTCCCATTTTTAACCCTCCTGAATGGCCTCCTTTCTTGCAAACACCTGCTCCACAATACCGCGCTGTTAGAACGGATTTTCTCCCGTTTTCTGATTTTCCAAATCCCTCCTGCAGAATCAATGGCTCATGTCCCCTCACTATGCTCTTTACTGGCACTAATCAGTCTTTTGGAGAAGTTTTGTCGCGGAATATGATTCCAAGTACCTTTGGTATAGATAATTCGAATGTTATGGGTAGTTTGGCGACAAATGTCTTGGGATCGGCATCAGAGACAGAGTTCACCAATTTTCTGGAGCCTGCTTTCTTTTCAGATCTTCCTATTTACTATCTACAAAATCAGTGCAGAAAGAACTCTACATTCTCCGTTCCTGTTCAGATATCAACTACTAGCAGGCAGCAAGAAGTAAGATGTGCTCAGACTTTGCGTTTATGGCGTAATAGTTCTTCTGAAGTAAACAATGAGCTATATAAAGGTTATAGAAAAGGTAACACAGAGCGGAAGATCAATGAGATAACTGCAGGTTATGATTTTCTAAACTCAAATGAGAATATATTTAATGTCAGTATATGGTACAACTCAACCTATCAAAATGACACCGGCTTTGATTCTATTGCATTGGCACGGATTCCTCGTTCTGTAAATTTGGCATCAAATGCCTACCTTCAGTTTCTCTTGGGACCAGGTACCAAAATGTTGTTTGAGTTTGTAAAGGAAATGCCGAAACCTGAAACTCCCGTTAAATTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTTATCCTGCAACTTTTCCCAGTTGTCCTCACATCACTAGTTTATGAGAAGCAACAAAATTTAAGAATCATGATGAAAATGCATGGTCTCGGTGATGGGCCATTTTGGATGATTTCATATAGTTATTTTCTTGCCATATCAATTATTTACATGCTTTGTTTTGTGATATTTGGCTCAGTCATAGGACTAAAATTCTTCACAATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTTCGTTGGCATTTTTATTGGCCTCCCTGTTTTCAAATGTTAAGACCGCTACAGTGATTGCATATATAGGTGTGTTTGGAACTGGGCTATTAGCTGGTTTTCTTTTCCAATTTTTTGTTCAAGATACATCGTTTCCAAGAGGGTGGATCATTGTTATGGAGTTATATCCAGGGTTTGCTTTATACCGTGGGTTATATGAATTTTCACAATATTCTTTTAGTGGAGATACTTTGGGGACTCATGGTATGAAGTGGGGAGATCTCAGTGATAGCACAAATGGCATGAAAGAGGTCTTGATTATCATTTTCGTGGAGTGGCTATTAGTTCTATTCTTCGCTTATTACGTTGATCAAGTTTTGTCATCAGGAAGTTGGAAAAGTCCTCTTTTGTTCTTGAAAAGATTTCAGAAAAAAACTAGTTCATCTTTTCGGAAGCCTAGTATCCAAAGGCAGGGATCTAAAGTTTTTGTTATGGCTGAGAAACAAGATATTCATCAAGAGAAGGAGAAGGTGGAACAGCTGCTACTTGAACCAACTATGAATCATGCAATTGTTTGTGACAAATTGAGAAAAGTTTATCCAGGGAAGGATGGTAACCCAGATAAAATTGCGGTGAGAGAGTTGTCCCTTGCTTTGCCTCAAGGGGAATGCTTTGGAATGCTTGGTCCCAATGGTGCAGGGAAAACTTCTTTTATCAACATGATGATAGGTCTCACAAAGCCAACCTCTGGTACAACATTTGTTCAAGGTCTTGACGTAAGAACTGATATGAATCGAATATATACTAGCATGGGTGTATGCCCTCAGCATGATTTGCTGTGGGAAGTCTTGACAGGACGAGAGCACCTACTCTTTTATGGCAGGCTTAAAAATCTTAAAGGTTCTGCCTTAGCACAAGCAGTGGAAGAATCTTTGAAAAGCGTAAACCTTTTTTATGGAGGGTTTGCTGATAAACAAGCGGGAAAATATAGCGGAGGAATGAAGAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAGAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAAGAACCTATGGAATGTTGTCAAGCGTGCAAAACAGGATCGTGctatcattctcactaCACATTCCATGGAAGAGGCGGAAGTCTTATGTGATCGATTAGGAATATTTGTAGATGGTAGCTTTCAGTGCATTGGAAATCCGAAGGAGCTGAAAGGCAGATATGGAGGAACTTATGTGTTCTCAATGGCAACATCTATTGATCATGAAATGGAAGTTGAGAAATTGGTGCAACATCTTTCCTCAAATGCTAAGAAGATTTACCATATCTCTGGGACCCAAAAGTTTGAGCTTCCAAAAGATGAGGTTAGAATAGCTAATGTATTCAAAGCTGTTGAAACTGCAAAGGGAAACTTCACAGTTTCTGCATGGGGTTTAGCTGACACAACATTGGAAGATGTTTTCATTAAGGTTGCACGTGAGGAGGCTCACTCATATGATACTTTATCATAA 2853 0.3915 MRNGNRANEPASFWTQANALLRKNLTFQKRNVNTNIRLILIPFGLCILMVLLQKLLNNQFDKAKYKCGCICTKTQGEQCLEKACGVQYSDFDQVGACPIFNPPEWPPFLQTPAPQYRAVRTDFLPFSDFPNPSCRINGSCPLTMLFTGTNQSFGEVLSRNMIPSTFGIDNSNVMGSLATNVLGSASETEFTNFLEPAFFSDLPIYYLQNQCRKNSTFSVPVQISTTSRQQEVRCAQTLRLWRNSSSEVNNELYKGYRKGNTERKINEITAGYDFLNSNENIFNVSIWYNSTYQNDTGFDSIALARIPRSVNLASNAYLQFLLGPGTKMLFEFVKEMPKPETPVKFDLASLLGGLFFTWVILQLFPVVLTSLVYEKQQNLRIMMKMHGLGDGPFWMISYSYFLAISIIYMLCFVIFGSVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVIAYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFSGDTLGTHGMKWGDLSDSTNGMKEVLIIIFVEWLLVLFFAYYVDQVLSSGSWKSPLLFLKRFQKKTSSSFRKPSIQRQGSKVFVMAEKQDIHQEKEKVEQLLLEPTMNHAIVCDKLRKVYPGKDGNPDKIAVRELSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTTFVQGLDVRTDMNRIYTSMGVCPQHDLLWEVLTGREHLLFYGRLKNLKGSALAQAVEESLKSVNLFYGGFADKQAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSFQCIGNPKELKGRYGGTYVFSMATSIDHEMEVEKLVQHLSSNAKKIYHISGTQKFELPKDEVRIANVFKAVETAKGNFTVSAWGLADTTLEDVFIKVAREEAHSYDTLS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00753 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 867 IPR027417 -
Car05g00753 950 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 627 864 IPR003439 GO:0005524
Car05g00753 950 SMART AAA_5 657 840 IPR003593 -
Car05g00753 950 Coils Coil 600 620 - -
Car05g00753 950 ProSitePatterns ABC transporters family signature. 766 780 IPR017871 GO:0005524
Car05g00753 950 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 942 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car05g00753 950 CDD ABC_subfamily_A 631 852 - -
Car05g00753 950 Gene3D - 617 895 IPR027417 -
Car05g00753 950 Pfam ABC-2 family transporter protein 279 553 - -
Car05g00753 950 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 942 - -
Car05g00753 950 Pfam ABC transporter 649 793 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00753 Car-Chr5 42405293 42418704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00753 636 856 Calmodulin-binding Proteins AT2G36910 25.214 4.20e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00753 - - cam:101495128 1899.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00753 05 42405293 42418704 Car05g00753 05 42405293 42418704 ECH