Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00752 ATGAGCAACACTTTATCTCTTATAACACAACAATACAAATCTCTATTAAAAAAGAACATACTATTATCATGGCGAAGCAAGAGATCAATCCTTCTCCAATTACTCTCTCCAATATTATTCATTTTCTTAATATTCGCTGTAGACAAAGCAATCAAAGCACAAACATCAACAACTTCATCTTTCAAATCAATAACAAACCCAAAATTAATACCTTCACCACCAATCCCACCTTGTGAACACAAATTCTTCATCAAACAACCTTGCTACGATTTCATATGGAGTGGTGATCAAAACCCCAAGTTTCAAACCATCGTGGGCCGGATCATTCAAAATAACCCGGGTAGGCCCATACCCGTTTCGAAGGTTAAGTCGTTTCGTGATAAAGATGAAGTTGATCAGTGGCTTTTTAGGAATCCTATGCAGTGTCCTGCTGCGGTTCATTTTGTTGAGAAGAATGGGAGTGTTATTGGGTATGGGATACAAACGAATTCAACTAGTCTTCAGAAAAGAGGGAGATTTGAAGATCCTACTCTTTCTTTTCAAATTCCTCTTCAGCTTGCTGCTGAACGTGAAATCGCTAGATACCTTATTGGAGACCCAAGCTTCAAGTGGAATGTGTTTTTGAAGGAATTTGCGCACCCAGCTATGAGTCCTTTCTCTGCGGTTGGATCGATAGGTCCAGCATTTTTTCTTGCAATTGCTATGTTTAATTTTGTTCTTCAGATGAGTTCTTTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACCGTGATGGGGCTTTACGACTCTGCGTACTGGTTATCATGGCTAACCTGGGAAACAGTTGTTACACTTCTATCATCTATTCTCATAATTCTCTCTGGCATGATGTTTCAGTTTCAATTTTTCTTGAAAAACAGTTTCACCGTTCTGTTCATTTTGTTCTTCCTATTTGAACTCAACATGACTGGGTTGGCCTTCATGTTATCCGCTTTCATTCGTAAATCATCTTCAGCAACAACTGTTGGCTTCTCCATATTTATTGTCGGCTTTGTGACTCAGCTTGTGGTACAAGCAGGATTTCCTTACACCGATAGCATATCTCTTAAGTTACGAAATATATGGTCATTGTTCCCTCCTAATCCGTTTGCTCAAGCCCTGAAAGTGCTCTCAGGTGCAGTATCAACCCCTGAAGATGGCGGTGTCAGCTGGAGTAAACGGGGAGAATGCGCAGTTAACGACGATGACTGTGTGATAACAATTAATGATATTTATAAATGGCTTTTGGGGACATTCTTTCTGTGGTTTGTTCTGGCAATCTACTTCGACAATATAATCCCAAATGCAATGGGTGTTAGGAAATCCGTGTTATACTTTCTAAATCCTCGTTATTGGACAGGAAATGGAGGACAAAAAGTGAAAGAGGGTGGGGTTTGTAGTTGCTTTATTTCATCCCAACATGAAGAGAATAGTACACCAGATGATGAAGATGTACTTGAAGAAGAAAATACTGTTAAACAGCAACTAACACAAGGCGTGGTTGACGCAAATATTGCTGTACAGATACATGGCATTGCGAAGACTTATCCCGGTACATTTAACATTGGTTGCTGCTGTAAATGTAAAAGAAGTACACCTTACCATGCTGTTAAGGGCTTGTGGGTGAACTTTACAAAGGATCAGTTATTTTGTCTTTTAGGACCCAATGGAGCTGGAAAAACTACAGCTATTAATTGTTTGACTGGGATAACTCCAGTAACTGACGGAGATGCATTGATTTATGGACATTCGGTCCGAAGCTCCACTGGCATGTCAAACATTCGAAAGCTTATAGGAGTGTGTCCCCAGTTTGATATCCTATGGGATGCACTGTCTGGTCAAGAACACCTGGAACTCTTTGCTAGTATTAAAGGCCTGTCCCCGGCTTCTATAAAATCGATTACTCAGACATCCTTAGCAGAGGTGAGACTCATGGATGCAGCCAAAGTAAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTTAGTGTTGCAATTGCTCTTATCGGTGACCCGAAATTAGTCATTTTGGATGAACCGACTACCGGTATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATTGAAAATGCAAAAAGAGGGCGTGCCATTGTTCTCACAACACATTCTATGGAAGAAGCCGACATTCTAAGTGACCGCATTGGAATCATGGCAAAGGGAAGGCTCCGCTGTATTGGTACCTCAATCAGATTGAAGTCGCGCTTCGGTACTGGTTTTATTGCTAATATTAGCTTCTATGGAAACAATATTGAGCATGGTCCTGCAAATGGAGATGACATATCAGCAACACATCGTGAGGCTGTGAAGCAATTCTTTAAGAATCATTTAGATGTAGTACCAAAAGAGGAGAACAATAACTTTCTTACTTATGTGATTCCTCATGAAAGAGAGGCACTCCTAACAAATTTTTTTTCGGAACTCCAAGACAGAGAAGAAGAGTTTGGCATATCTGACATCCAGCTTGGTCTAACAACTCTTGAAGAAGTTTTCTTGAATATTGCAAAGCAAGCAGAGCTAGAAAGTGCTGCAGCTGAAGGGAGCCTAGTGACTTTGTCTTTGACATCTGGAGAGTCTATGCAGATTCCTGTAGGAGCTAGATTTGTGGGAATTCCAGGAACAGAGTCTGCTGAAAACCCGACAGGCTTTATGGTAGAAGTATACTGGGAGCAAGACGACACCGGTGCACTTTGTGTCGCTGGCCACTCGCCGAAAGCTCCTATTCCTCAAAATATCCAACTATCATATGCTACTGCTAGACAAAGTAGAAATGTTGGCCGGTCAGCGGCGGTTCATGGGGTTGTCATTGATCCTAGTCAAGTTAGTTCAGTTAATTTTTAG 2889 0.4126 MSNTLSLITQQYKSLLKKNILLSWRSKRSILLQLLSPILFIFLIFAVDKAIKAQTSTTSSFKSITNPKLIPSPPIPPCEHKFFIKQPCYDFIWSGDQNPKFQTIVGRIIQNNPGRPIPVSKVKSFRDKDEVDQWLFRNPMQCPAAVHFVEKNGSVIGYGIQTNSTSLQKRGRFEDPTLSFQIPLQLAAEREIARYLIGDPSFKWNVFLKEFAHPAMSPFSAVGSIGPAFFLAIAMFNFVLQMSSLVTEKELKLRQAMTVMGLYDSAYWLSWLTWETVVTLLSSILIILSGMMFQFQFFLKNSFTVLFILFFLFELNMTGLAFMLSAFIRKSSSATTVGFSIFIVGFVTQLVVQAGFPYTDSISLKLRNIWSLFPPNPFAQALKVLSGAVSTPEDGGVSWSKRGECAVNDDDCVITINDIYKWLLGTFFLWFVLAIYFDNIIPNAMGVRKSVLYFLNPRYWTGNGGQKVKEGGVCSCFISSQHEENSTPDDEDVLEEENTVKQQLTQGVVDANIAVQIHGIAKTYPGTFNIGCCCKCKRSTPYHAVKGLWVNFTKDQLFCLLGPNGAGKTTAINCLTGITPVTDGDALIYGHSVRSSTGMSNIRKLIGVCPQFDILWDALSGQEHLELFASIKGLSPASIKSITQTSLAEVRLMDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFYGNNIEHGPANGDDISATHREAVKQFFKNHLDVVPKEENNNFLTYVIPHEREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIAKQAELESAAAEGSLVTLSLTSGESMQIPVGARFVGIPGTESAENPTGFMVEVYWEQDDTGALCVAGHSPKAPIPQNIQLSYATARQSRNVGRSAAVHGVVIDPSQVSSVNF 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00752 962 CDD ABC_subfamily_A 515 749 - -
Car05g00752 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 541 743 IPR027417 -
Car05g00752 962 Pfam ABC-2 family transporter protein 27 436 - -
Car05g00752 962 Gene3D - 515 759 IPR027417 -
Car05g00752 962 SMART AAA_5 554 738 IPR003593 -
Car05g00752 962 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 6 931 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car05g00752 962 ProSitePatterns ABC transporters family signature. 663 677 IPR017871 GO:0005524
Car05g00752 962 Pfam ABC transporter 548 690 IPR003439 GO:0005524
Car05g00752 962 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 515 761 IPR003439 GO:0005524
Car05g00752 962 PANTHER ABC TRANSPORTER A FAMILY MEMBER 1-RELATED 6 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00752 Car-Chr5 42371965 42379276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00752 559 760 Calmodulin-binding Proteins AT2G36910 23.445 8.84e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00752 - - gmx:100786538 1602.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00752 05 42371965 42379276 Car05g00752 05 42371965 42379276 ECH