Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00749 ATGGATTCTCTCAAAATTTTCAAAGGATATGACAAAGTAGAACACAAACACGACAACCTCGAAGATCAACAAATCCAACCACAACACCACCTTCACAAAATCTCCAAACCCCTCATTACCACAATTTCcatcatcatcatcaccatcctcttcCTTACTCTCACTTTATCTTTCACCCTTTTCCACCACCAAACCAACACCGAGTCACAAAACCCCCTCAACTCACCCAACTCAATCCGATCCATCTGCAACGTGACTCGCTTCCCTGATTCATGCTTCACCGCTTTATCTTCCTCAAATCAAAACCCCACCGACTCAAAAACCATCCTCAAACTCTCTCTTCGTTCCTCCATCGACGAACTCACCAAACTCGCATCGTCGCTCGGAGCAAACTCCAACGGAAACGCGCTCGGTGATTGCAAGGAACAGATTGATGACGCGGTGAGTCGACTCAACGACTCAGTCTCGACGGTTACTAACGGCACCGTGAATTTAACGGATGTTGAAATTAACGATATTCAGACGTGGGTTAGTGCCGCGTTGACGGATCAAGAAACGTGTGTTGATGGATTGGAAGAGGCTGGGTTTTCTTTGGGTACTGTTGATAAGGTAAAGAAAATGATGAAGAAATCGAATGAGTATACTAGCAATAGTTTGGCTATTGTTGCTAATATACGCAATTTGTTCCATTGA 693 0.4271 MDSLKIFKGYDKVEHKHDNLEDQQIQPQHHLHKISKPLITTISIIIITILFLTLTLSFTLFHHQTNTESQNPLNSPNSIRSICNVTRFPDSCFTALSSSNQNPTDSKTILKLSLRSSIDELTKLASSLGANSNGNALGDCKEQIDDAVSRLNDSVSTVTNGTVNLTDVEINDIQTWVSAALTDQETCVDGLEEAGFSLGTVDKVKKMMKKSNEYTSNSLAIVANIRNLFH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00749 230 CDD PMEI-like_3 81 225 - -
Car05g00749 230 Pfam Plant invertase/pectin methylesterase inhibitor 78 221 IPR006501 GO:0004857
Car05g00749 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 226 IPR035513 -
Car05g00749 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 225 IPR035513 -
Car05g00749 230 SMART PMEI_2 74 221 IPR006501 GO:0004857
Car05g00749 230 PANTHER PECTINESTERASE 1-LIKE 3 224 - -
Car05g00749 230 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 224 IPR006501 GO:0004857
Car05g00749 230 PANTHER PECTINESTERASE 3 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00749 Car-Chr5 42290062 42291140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00749 1 225 Carbohydrate Esterase AT1G53840 34.553 8.86e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00749 - - aprc:113852848 202.216