Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00737 ATGAAGAAGAGACAGGTTGTTGTTAAAAGAGATGTGGCTAACAACACTTCATCTTCAGTGATAAGAAATATTAGATATGGAGAGTGTCAAAAGAATCATGCAGCAAATATTGGAGGGTATGCTGTGGATGGTTGCAGAGAGTTTATGGCTAATACAGGGGAAGGAACAATTGGATCTCTTACATGTGCTGCTTGTGGTTGTCATAGAAACTTTCATAGAAGAGAAGTGCACACCGAAGTTGTTTATGAGAAATTGTATATTATGCTGAGGAATTGA 276 0.3768 MKKRQVVVKRDVANNTSSSVIRNIRYGECQKNHAANIGGYAVDGCREFMANTGEGTIGSLTCAACGCHRNFHRREVHTEVVYEKLYIMLRN 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00737 91 PANTHER MINI ZINC FINGER PROTEIN 3 1 83 - -
Car05g00737 91 Pfam ZF-HD protein dimerisation region 24 76 IPR006456 -
Car05g00737 91 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 26 75 IPR006456 -
Car05g00737 91 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 25 76 IPR006456 -
Car05g00737 91 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00737 Car-Chr5 41764377 41766160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00737 1 81 Zinc finger-homeobox gene family AT3G28917 64.045 5.69e-35 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Car05g00737 ZF-HD_dimer 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00737 - - gmx:100785967 145.591