Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00715 ATGGCGCTGTTCCGAAGGTTCTTTTACCGGAAACCGCCGGATCGTCTTCTTGAGATCTCCGAGAGAGTCTATGTTTTTGATTGCTGCTTCTCTACGGATGTCTTGGAAGAAGATGAGTACAAAGTCTATATTGGGGGCATTGTAGCTCAGCTACAAGATCACTTTCCAGATGGTTCTTTCATGGTGTTTAATTTCAGAGAAGGGGATAGACGCAGCCAAATTTCAGATATATTATCTCTTTGTGACATGACAGTTATGGAGTACCCTCGGCAATACGAGGGGTGTCCACTTCTGCCTTTAGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGGGGTTGGCCCGTCCTCACATTTATGCTAGCTGGTCTTTTGTTGTACCGGAAACAATACAACGGAGAGCTGAAGACTCTTGAGATGGTCTACAAGCAAGCGCCGAGAGAACTTCTCCAGCTTTTATCTCCTTTGAATCCGCAACCTTCTCAGTTAAGATATCTCCAGTATATTTCCAGGAGACATTTGGGATCTGAGTGGCCTCCATCAGAGACACCCTTATATTTGGATTGTTTGATTCTTAGAGATCTTCCATTATTTGATGATGAAAAAGGTTGCCGGCCTGTTGTACGTGTTTATGGTCCAGACCCTTCACAACCTGCCAATAGAAGTTCTAAGCTTCTTTTCTCAACTTCGAAAACCCAAAACTTTGTCCGCCACTACCTGCAGGCAGAATGTATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTCGAATGCATACATTTGAGTGAAGATTTCATTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTTGTACGGTCAAATATTTTGGTGCTGAGCCGTGATGAAATCGATATTTTGTGGGATACAAAGGATCAGTTCCCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTAATCTAACCACAGTCCATGTGAGTGAAGATGTAAATGAGACAGAAAGCGGTTCACCTGAGGAATTCTATGAAGTGGAAGAGATCTTCAGCAATGTAATCGATTCACAGGAAGGTAAGGGGGATTATGATTCTCCAATGGTTCATGACAATGCAGTAGATGATGGAAGCCGTAAAGATGTCTGGAAAGAGTATTCAGATCCTCATACTTTTCAGGATTCTTCGACAGATGATGGGATTCACCATCAAGTTGGAAGGACGGATTCTGGTATTAATGAGGTGAAAGACATTACTGTTGATGATGTGAAATACAAGCTCGACGAGCGTGTAGATTCAGATACTCATGCAGTGAAAGATATTGCTGTGGATGATGGAGAAAATAACTCAACTTCCATTGCAGTCACTTTTGATATGATGGAAACTCTGGAAAGGCAGGAAGTCACTTCGGATGTGCATGATGATTCGGCAGTTGTGCGAAACAAGTATGGCGAAGATAACAATGCAACGCTAAAAGAATTAGAGGCGGAGGAAGGGCAGCAGATGCATGATCTCTCCGAATCAGTATCTGTTGAAAAGAAACAACTTTCTTCAATTGCAGCAAAGCAAAAGACTAAAAATCAAGAACTCCAGGGATTTCCAGCAAAACAAGCAAAGGCAAATGCAACAACTAGGTGGATACCTTCTAACAAGGGTTCTTATCAAGATTCGATGCATGTTTCATATCCACCGACGAGGCATATTAATTCACCAGTTGCTCTGCCAAGTGCTATCTCTGCAAAGGAGAAAATGACTAATGCCAAAGAAAAATATGTTTCTAGTTCTCATGCCTATGAAGCAGTTGATTCTATGGACATGACCAGTGACCTGAAAAATTGTAATGGGGACAATTCACCACCTCATCCTCCCCATCCACACATATCACCATCTTCTTCCTTGGATGCACCTTCACCACCACCACCACCTCCTTCGATGTCTAAGGCCCCACCTCCACCATTCTATGGAACTccaccaccaccaccaccaccaccaccTCTTCCTCCATCAAGTGGAGCACCTCCACCACCGCCTCTTTTGATGTCTAAGGCCCCACCTCCTCCACCTCCACCATTCTATGGAGCTCAaccatcaccaccaccaccaccaccaccaccaccaccaccTCTTCCTCCATCAAGTGGAGcacctcaacaaccaccaccaccaccTCATTTGATGTCTAAGGCCCCCCCTCCCCCTCCTCCACCATTCTATGGAGCTCAACCACCACCACCACCTCCTCCTCTTTTGATATCTAAGGCCCCACCTCCTCCACCCCCACCATTCTATGGAGCTCCACCACCCCCCCTACCTCCAATGCATGGAGCGCCACCCCCACCACCTCCAATGCTTGTAGCACGAGCACCACCTCCTCCACCACTTCCAGGTGGTCAAGGCCCACCTCCTCCGCCACTTCCAGGTGGTCGTGGCCCACCTCCTCCACCACTTCCAGGTGGTTACGGCCCACCTCCTCCTCCACCTCCGGGTAGTCAAGGCCCACCTCCTCCGCCACCTCCAGGTGGCCGAGGCCCACCTCCACCACCTCCTCCTGGAGGTCAAGCTCCTGGTGCTCCTGCACCTCCTAGACTTCCAGGTGGTGCACCTCCACCACCTGGGGCTGATCCTAGAGGGAGAGGGCGTGGACTTGCACGTCCTACAGGTGCTAGTGCAGCAGCACCTCGACGATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCACTCCAAGGAAGTTTATGGGAAGAATTACAAAGACACGGAGAATCTCAAATTGGACAAGACTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTGCAAATGTTCCAAAACCTGCAGCTTCTGGGGGTAAAGCTGGGCAGGGCAAGGCTGCAGGATCCAAAAATGAGAAAGTCACCTTGGTTGACCTAAGGAGAGCCTATAATACTGAAATTATGCTCACAAAAGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGACTCAGTATTAGATGCTGATCAAGTGGAAAATCTTATTAAATTTTGTCCTACAAAAGAGGAAATGGATCTTTTGAAGGCATACACTGGTGACAAGGAGAATTTGGGAAAGTGTGAACAGTTCTTTTTTGAGCTGATGAAAGTGCCACGAGTGGAGTCGAAATTAAGAGTtttctgtttcaagattcagtttcagtctcagATTACAGAGTTCAATAAGAGTTTAAATATAGTGAACTCTGCTTGTGAAGAGGTCCGAAATTCACTCAAACTGAAGGAGATTTTGAAGAAAATCCTTTATTTGGGTAATACATTGAATCAAGGAACCGCAAGGGGGTCTGCTGTTGGATTCAAGATGGATAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGTAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTACACTCCTTGATTTTCATCTTGACCTTGTTAGCATAGAAACTTCCTCTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATCACCAAGGGATTAGAAAAAGTAAACCAGGAGCTTGCTGCATCTGAAAATGACGGTCCAGTGTCTGACGTTTTCCGTAAGACATTGCAAGAATTCATTAATGTAGCCAAGTCACAGGTGGATTCTGTAACACGCCTATATTCTGAAGTGGGTAGAAATGCGGATGCACTTGCACTGTATTTCGGTGAGGATCCTGCCCGTTTTCCATTTGAACAAGTTACTGCAACTCTCTTAAATTTTATAAGGTTGTTTCGCAAAGCACATGAAGAGAATATCAAACATGCAGAGTTAGAGAAGAAGAAAGCTGAAAAAGAGGCTGAAATGGAGAAGAGTAAAGGCAGTAACTTGCCAAAGAAGAGTGGAAAAGATAATGAAGAAGAAAGCTGA 3987 0.4362 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYIGGIVAQLQDHFPDGSFMVFNFREGDRRSQISDILSLCDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLTFMLAGLLLYRKQYNGELKTLEMVYKQAPRELLQLLSPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILRDLPLFDDEKGCRPVVRVYGPDPSQPANRSSKLLFSTSKTQNFVRHYLQAECMLVKIDIRCRVQGDVVLECIHLSEDFIREEMMFRVMFHTAFVRSNILVLSRDEIDILWDTKDQFPKDFKSEVLFLDADAVIPNLTTVHVSEDVNETESGSPEEFYEVEEIFSNVIDSQEGKGDYDSPMVHDNAVDDGSRKDVWKEYSDPHTFQDSSTDDGIHHQVGRTDSGINEVKDITVDDVKYKLDERVDSDTHAVKDIAVDDGENNSTSIAVTFDMMETLERQEVTSDVHDDSAVVRNKYGEDNNATLKELEAEEGQQMHDLSESVSVEKKQLSSIAAKQKTKNQELQGFPAKQAKANATTRWIPSNKGSYQDSMHVSYPPTRHINSPVALPSAISAKEKMTNAKEKYVSSSHAYEAVDSMDMTSDLKNCNGDNSPPHPPHPHISPSSSLDAPSPPPPPPSMSKAPPPPFYGTPPPPPPPPPLPPSSGAPPPPPLLMSKAPPPPPPPFYGAQPSPPPPPPPPPPPLPPSSGAPQQPPPPPHLMSKAPPPPPPPFYGAQPPPPPPPLLISKAPPPPPPPFYGAPPPPLPPMHGAPPPPPPMLVARAPPPPPLPGGQGPPPPPLPGGRGPPPPPLPGGYGPPPPPPPGSQGPPPPPPPGGRGPPPPPPPGGQAPGAPAPPRLPGGAPPPPGADPRGRGRGLARPTGASAAAPRRSSLKPLHWSKVTRALQGSLWEELQRHGESQIGQDFDVSELEKLFAANVPKPAASGGKAGQGKAAGSKNEKVTLVDLRRAYNTEIMLTKVKMPLPDMMAAVLAMDDSVLDADQVENLIKFCPTKEEMDLLKAYTGDKENLGKCEQFFFELMKVPRVESKLRVFCFKIQFQSQITEFNKSLNIVNSACEEVRNSLKLKEILKKILYLGNTLNQGTARGSAVGFKMDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPTLLDFHLDLVSIETSSKIQLKSLAEEMQAITKGLEKVNQELAASENDGPVSDVFRKTLQEFINVAKSQVDSVTRLYSEVGRNADALALYFGEDPARFPFEQVTATLLNFIRLFRKAHEENIKHAELEKKKAEKEAEMEKSKGSNLPKKSGKDNEEES 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00715 1328 PRINTS Proline rich extensin signature 711 727 - -
Car05g00715 1328 PRINTS Proline rich extensin signature 690 711 - -
Car05g00715 1328 PRINTS Proline rich extensin signature 657 673 - -
Car05g00715 1328 PRINTS Proline rich extensin signature 639 651 - -
Car05g00715 1328 PRINTS Proline rich extensin signature 678 690 - -
Car05g00715 1328 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Car05g00715 1328 ProSiteProfiles Formin homology-2 (FH2) domain profile. 910 1310 IPR015425 -
Car05g00715 1328 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Car05g00715 1328 SUPERFAMILY Formin homology 2 domain (FH2 domain) 923 1304 - -
Car05g00715 1328 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Car05g00715 1328 MobiDBLite consensus disorder prediction 640 897 - -
Car05g00715 1328 SMART PTEN_C2_2 198 338 IPR014020 -
Car05g00715 1328 MobiDBLite consensus disorder prediction 629 921 - -
Car05g00715 1328 MobiDBLite consensus disorder prediction 1294 1328 - -
Car05g00715 1328 Gene3D - 206 336 - -
Car05g00715 1328 Pfam Formin Homology 2 Domain 916 1284 IPR015425 -
Car05g00715 1328 Coils Coil 1285 1314 - -
Car05g00715 1328 Gene3D Formin, FH2 domain 910 1296 IPR042201 -
Car05g00715 1328 Coils Coil 1191 1218 - -
Car05g00715 1328 PANTHER FORMIN-J 1 718 - -
Car05g00715 1328 PANTHER FORMIN-J 833 1320 - -
Car05g00715 1328 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car05g00715 1328 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Car05g00715 1328 SMART it6_source 577 1328 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00715 Car-Chr5 40028386 40060970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00715 1 668 FH2 protein (formin) Gene Family AT5G07740 59.275 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00715 - - cam:101505448 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00715 05 40028386 40060970 Car05g00715 05 40028386 40060970 ECH