Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00702 ATGGAGAGTGAGGGGTTTAATTTGAATAGAGAAACAAGTGGTGGGAATAATGGTGGTAAGATTGGTGATGGTTTCGTTGATAGAAGTAAAGTGCGGATTTTGCTTTGTGATAGCGATGTCAATAGCTCTCAAGAGGTTGTTACACTTCTGTTAAGATGCTGTTATCAGGTTATTTCAGTGAAGTCAGCAAGACAGGTAATTGATGCACTTAATGCCGAGGGAGATCACATAGATCTCATACTAGCTGAAGTTGGTCTTCCGAAGAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGAGACAAAGGATTGCACAGAATTCCTGTTATAATGATGTCTGCACAAGATGAGGTATCTGTTGTTGTCAAGTGCTTGAAACTTGGAGCAGCTGACTATCTAGTAAAGCCTTTACGCACAAATGAACTATTAAACTTGTGGACGCACATGTGGAGAAGGAGGCGCATGCTTGGACTTGCAGAGAAGAACATGTTAAATTATGACTTTGATTTGGTAGCATCAGAGCCTAGTGATGCCAATACAAACAGTACCACCTTATTCTCTGATGACACCGATGATAAGTCCAAGAGAAGCATTGTTCCAGAGACAGGAATTTCAGGCCAACAAGAGCAAGAGTCTACTGTTGCACTTTCTGCTGCTGTTTATGAAACTCCAGATCTTCATGCATCAGAATGCTTGCCTGATGTCCATGGAATAAATGATCAGCTAACAGCACATTTTTCATCTGGTCCAAAGAAGAGTGAACTAAGGATTGGGGTTGGGGAAACATCAGCCTTCTTCACTTATGTTAAAGCATCAATGCTAAAGAGAAACCTTGAAGGGATTGACCATGTCGACAAAGATGCTGCCTCACATATGAGAGATCTTGAAGGGATTGATGAAGCATGTGTTCAACAAGGGGCTAGTGACCTCAAAATACGTGAAAATCGAGAGACGTGTGAAAGTCAATCGCAAAATGACTTACCCAGCAGCAATATACCTGATTCTTTATCTATTGAGAGATCTTGTACTCCACCTGCATCAATGGAAGGTTCACAGCAAAACCATTACAAGGAAAAAAATTTACATCACGGTCTAATGCATCCAAGAAATGGGACACACTATTCAGAGCTTGAAATATCTGGCGTGGCTGCACAACATGCGTATCCATATTATTTGTCAGGGGTTATTAATCATGTTTTGATGCCTTCTTCGGCACAAATGTATCAAAAGAATGTGCAGGACTTGCAGAATCATGATAGTACATCTATGATTGGGCCCCAGTACAATCATCTTCCACAAGGCGGTCCTCATGCGACCGGCATGATGTCCTTCCCATATTACCCAATGAGTATGTGCTTACAACCGGGTCAGATTCCTACAGCTCATTCATGGCCCTCGTTTGGAGGCTCAAGATCATCCGAAGCAAAATTAACTAAAGTTGATAGAAGAGAAGCAGCGTTGATTAAATTCAGACAGAAGAGGAAAGAGCGTTGCTTTGATAAGAAAATTAGGTATGTCAATCGGAAACAACTGGCTGAAAGAAGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTCAAATGGTGCTAATTTGGATCTTAATGGACAGCCTCCTTCCATtgaatatgatgatgatgaagaagacgaagatgaCCGGAGAGCTAGAGATTACTCACCTGGGGATGTTTGA 1689 0.4115 MESEGFNLNRETSGGNNGGKIGDGFVDRSKVRILLCDSDVNSSQEVVTLLLRCCYQVISVKSARQVIDALNAEGDHIDLILAEVGLPKKKGMKMLKYIARDKGLHRIPVIMMSAQDEVSVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLNYDFDLVASEPSDANTNSTTLFSDDTDDKSKRSIVPETGISGQQEQESTVALSAAVYETPDLHASECLPDVHGINDQLTAHFSSGPKKSELRIGVGETSAFFTYVKASMLKRNLEGIDHVDKDAASHMRDLEGIDEACVQQGASDLKIRENRETCESQSQNDLPSSNIPDSLSIERSCTPPASMEGSQQNHYKEKNLHHGLMHPRNGTHYSELEISGVAAQHAYPYYLSGVINHVLMPSSAQMYQKNVQDLQNHDSTSMIGPQYNHLPQGGPHATGMMSFPYYPMSMCLQPGQIPTAHSWPSFGGSRSSEAKLTKVDRREAALIKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKSNGANLDLNGQPPSIEYDDDEEDEDDRRARDYSPGDV 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00702 562 MobiDBLite consensus disorder prediction 321 354 - -
Car05g00702 562 MobiDBLite consensus disorder prediction 517 562 - -
Car05g00702 562 ProSiteProfiles CCT domain profile. 483 525 IPR010402 GO:0005515
Car05g00702 562 MobiDBLite consensus disorder prediction 1 16 - -
Car05g00702 562 Pfam Response regulator receiver domain 33 144 IPR001789 GO:0000160
Car05g00702 562 ProSiteProfiles Response regulatory domain profile. 32 150 IPR001789 GO:0000160
Car05g00702 562 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 7 537 - -
Car05g00702 562 Pfam CCT motif 483 525 IPR010402 GO:0005515
Car05g00702 562 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 537 IPR045279 GO:0009736
Car05g00702 562 SUPERFAMILY CheY-like 29 157 IPR011006 -
Car05g00702 562 Gene3D - 31 250 - -
Car05g00702 562 MobiDBLite consensus disorder prediction 1 21 - -
Car05g00702 562 MobiDBLite consensus disorder prediction 317 354 - -
Car05g00702 562 SMART REC_2 31 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00702 Car-Chr5 39147754 39154284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00702 20 561 Response Regulator Gene Family AT5G61380 48.804 3.85e-171 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Car05g00702 Response_reg 4.9e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00702 K12127 - gmx:100799728 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00702 05 39147754 39154284 Car05g00702 05 39147754 39154284 ECH