Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00680 ATGACCACCGTTACAACACAGGCTTCTGCGGCCATTTTCCGGCCATGTGCTTCGAAATCGAGGTTCCTTACCGGATCATCCGGTAAACTGAACAGAGAAGTGGCTATTAGACCAATTGGTTTTTCTCCTTCTGCCTCTTTTAAGGTTGAAGCCAAGAAAGGAGAGTGGTTACCTGGATTGTCCTCCCCAGGTTACCTCACTGGCAGTCTTCCTGGTGACAATGGGTTTGATCCATTGGCACTTGCTGAGGATCCAGAGAACTTGAAATGGTTTGTTCAAGCTGAGCTTGTGAATGGACGTTGGGCCATGTTGGGTGTTGCAGGGATGTTACTCCCTGAGGTATTCACCAATATTGGAATTATCAATGTTCCAAAATGGTATGATGCTGGGAAAGAAGAGTACTTTGCTTCATCTTCAACCCTCTTTGTGATTGAGTTCATTCTGTTCCATTATGTTGAGATAAGAAGATGGCAAGACATTAAGAACCCTGGTAGTGTTAACCAAGATCCTATCTTCAAGCAATACAGCTTGCCTCCAAATGAGGTTGGATACCCCGGTGGCATTTTTAACCCCTTGAACTTTGCACCAACTTTGGAGGCTAAAGAGAAGGAACTTGCCAATGGGAGATTGGCAATGTTGGCATTTTTGGGATTTATAGTTCAGCACAACGTGACAGGCAAAGGACCATTTGATAACCTCTTGCAGCACCTTTCTGATCCATGGCACAACACCATTATTCAAACACTGAGTGGCAACTAA 759 0.4466 MTTVTTQASAAIFRPCASKSRFLTGSSGKLNREVAIRPIGFSPSASFKVEAKKGEWLPGLSSPGYLTGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLSDPWHNTIIQTLSGN 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00680 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Car05g00680 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Car05g00680 252 SUPERFAMILY Chlorophyll a-b binding protein 53 249 - -
Car05g00680 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Car05g00680 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00680 Car-Chr5 38198037 38200790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00680 43 250 Chloroplast and Mitochondria Gene Families AT3G61470 52.535 2.44e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00680 K08910 - rcu:8263414 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00680 05 38198037 38200790 Car05g00680 05 38198037 38200790 ECH