Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00675 ATGGGAAATATTTGCCTACGTGGAAGAAATATGACATTTTTTGTTAACAAAAATGCTACTAGAGAAAATGATAAATATTGCAAACAAGACAGGGATTCAAGGAAGAATAATAAATGTTTCTTCGCCTCGATATTGAAATTTGAAGGGCACAATATTCCCCTTGAGGAAGAGTTGATTCTAAAGAGAGAAGCATGCAGAGTTGTAAAGAACTCCAAAAGACGCTTTCGTTTCACTGTCAATCTCCAAACAAGGGGCAAAGCTGCTGCTAAGCGTTGTACCAATCAGGAGAAGCTGAGGGTGGCAGTTTTGGTTTCCAAAGCAGCATTTCAGTTTATGCAAGGCGTGCAACAAAGCGATTACAAAGTGCCAGAGGAAGTTAAAGATTCAGGATTCCAAATTTGTGGTGATGAATTGGGGTCTATTGTTGAAGGCCATGATGATGATCTTTGTGATGGTTTCTTGGACGCTAATGCATTAAATTGTTGTGTTGATTTCGTGCTTGCAGCTGACAATGAAATCTTTGGCCAGAGACGGTGA 537 0.3966 MGNICLRGRNMTFFVNKNATRENDKYCKQDRDSRKNNKCFFASILKFEGHNIPLEEELILKREACRVVKNSKRRFRFTVNLQTRGKAAAKRCTNQEKLRVAVLVSKAAFQFMQGVQQSDYKVPEEVKDSGFQICGDELGSIVEGHDDDLCDGFLDANALNCCVDFVLAADNEIFGQRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00675 178 Pfam Ca2+-ATPase N terminal autoinhibitory domain 55 84 IPR024750 GO:0005516
Car05g00675 178 PANTHER CATION TRANSPORTING ATPASE 55 146 - -
Car05g00675 178 PANTHER CALCIUM-TRANSPORTING ATPASE 55 146 - -
Car05g00675 178 Gene3D - 55 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00675 Car-Chr5 37846175 37850438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00675 56 146 Primary Pumps ATPases AT2G22950 73.913 1.96e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00675 K01537 - gmx:100792691 139.813