Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00671 | ATGGACAATATTGAGCAACTCGCTGTTTTGAAATATGATCATGTAATTCAAGATTATGATCCATTTGCACTTGTTAGCCaagaatcatcatatgataataataataatcatagtaataatCTTTACAGAAGCAATGCATGTGATGGTTATGTTTCAAAAGATTGGTCACATTATGGGTTTCCCATTCGAGAGACAAATTTTGATTCTATCCCTCTCATGGAATATTTTTGTCCTGAATTTCTGTATGAAACATTTCCTACTGAATCACCAACACCAATAAGTGTACAAGACTATGATTTTGGTGATGCTAAAAATGTATTTATGTGGAACGAACTTGATGCTGTGTTTTATTCGGATAAACATAGAGAAAGTAGTGCAAGGGAAATTTCTAAGGGTAAGCGATGTAAAGAAGAGAATAGTACGAGTGCAAGAATGCTATCAAGGAAGAAAATTTCTGAGTACTTCTACATGCCTATATCACAAGCTGCAAGACAGCTTAATGTTGGCCTTACACATTTGAAAAAAAGGTGTAGGGATCTTGGAATACAAAGGTGGCCACATAGGAAACTAATGAGCCTTCAAACACTCATAAAGAATGTACAAGAGCAAGGTAATGAAAATGATGAAAAAATAAGGAATGCGGTGGAGATATTAGAGAAAGAAATGAAGATGGTAGAGGAAAAGCCAGATTTGCAACTTGAAGAAAACACAAAGAGGCTTAGGCAAGCATGCTTCAAGGCAAATTACAAGAAGAGAAGGCTCATGGTCATGAGGTTAATGGATCAATAA | 789 | 0.3435 | MDNIEQLAVLKYDHVIQDYDPFALVSQESSYDNNNNHSNNLYRSNACDGYVSKDWSHYGFPIRETNFDSIPLMEYFCPEFLYETFPTESPTPISVQDYDFGDAKNVFMWNELDAVFYSDKHRESSAREISKGKRCKEENSTSARMLSRKKISEYFYMPISQAARQLNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEQGNENDEKIRNAVEILEKEMKMVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMRLMDQ | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00671 | 262 | Coils | Coil | 208 | 228 | - | - | |
Car05g00671 | 262 | PANTHER | PROTEIN RKD1-RELATED | 60 | 258 | - | - | |
Car05g00671 | 262 | ProSiteProfiles | RWP-RK domain profile. | 127 | 214 | IPR003035 | - | |
Car05g00671 | 262 | PANTHER | PROTEIN RKD4 | 60 | 258 | IPR044607 | GO:0003700 | |
Car05g00671 | 262 | Pfam | RWP-RK domain | 146 | 193 | IPR003035 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g00671 | Car-Chr5 | 37695576 | 37696834 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g00671 | 82 | 253 | AtRKD Transcription Factor Family | AT1G18790 | 50.838 | 4.71e-53 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | RWP-RK | Car05g00671 | RWP-RK | 6.4e-20 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00671 | - | - | mtr:MTR_3g435550 | 278.87 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car05g00671 | 05 | 37695576 | 37696834 | Car05g00671 | 05 | 37695576 | 37696834 | ECH | |
Car07g00942 | 07 | 8321108 | 8322154 | Car05g00671 | 05 | 37695576 | 37696834 | PCT |