Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00671 ATGGACAATATTGAGCAACTCGCTGTTTTGAAATATGATCATGTAATTCAAGATTATGATCCATTTGCACTTGTTAGCCaagaatcatcatatgataataataataatcatagtaataatCTTTACAGAAGCAATGCATGTGATGGTTATGTTTCAAAAGATTGGTCACATTATGGGTTTCCCATTCGAGAGACAAATTTTGATTCTATCCCTCTCATGGAATATTTTTGTCCTGAATTTCTGTATGAAACATTTCCTACTGAATCACCAACACCAATAAGTGTACAAGACTATGATTTTGGTGATGCTAAAAATGTATTTATGTGGAACGAACTTGATGCTGTGTTTTATTCGGATAAACATAGAGAAAGTAGTGCAAGGGAAATTTCTAAGGGTAAGCGATGTAAAGAAGAGAATAGTACGAGTGCAAGAATGCTATCAAGGAAGAAAATTTCTGAGTACTTCTACATGCCTATATCACAAGCTGCAAGACAGCTTAATGTTGGCCTTACACATTTGAAAAAAAGGTGTAGGGATCTTGGAATACAAAGGTGGCCACATAGGAAACTAATGAGCCTTCAAACACTCATAAAGAATGTACAAGAGCAAGGTAATGAAAATGATGAAAAAATAAGGAATGCGGTGGAGATATTAGAGAAAGAAATGAAGATGGTAGAGGAAAAGCCAGATTTGCAACTTGAAGAAAACACAAAGAGGCTTAGGCAAGCATGCTTCAAGGCAAATTACAAGAAGAGAAGGCTCATGGTCATGAGGTTAATGGATCAATAA 789 0.3435 MDNIEQLAVLKYDHVIQDYDPFALVSQESSYDNNNNHSNNLYRSNACDGYVSKDWSHYGFPIRETNFDSIPLMEYFCPEFLYETFPTESPTPISVQDYDFGDAKNVFMWNELDAVFYSDKHRESSAREISKGKRCKEENSTSARMLSRKKISEYFYMPISQAARQLNVGLTHLKKRCRDLGIQRWPHRKLMSLQTLIKNVQEQGNENDEKIRNAVEILEKEMKMVEEKPDLQLEENTKRLRQACFKANYKKRRLMVMRLMDQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00671 262 Coils Coil 208 228 - -
Car05g00671 262 PANTHER PROTEIN RKD1-RELATED 60 258 - -
Car05g00671 262 ProSiteProfiles RWP-RK domain profile. 127 214 IPR003035 -
Car05g00671 262 PANTHER PROTEIN RKD4 60 258 IPR044607 GO:0003700
Car05g00671 262 Pfam RWP-RK domain 146 193 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00671 Car-Chr5 37695576 37696834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00671 82 253 AtRKD Transcription Factor Family AT1G18790 50.838 4.71e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Car05g00671 RWP-RK 6.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00671 - - mtr:MTR_3g435550 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00671 05 37695576 37696834 Car05g00671 05 37695576 37696834 ECH
Car07g00942 07 8321108 8322154 Car05g00671 05 37695576 37696834 PCT