Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00659 ATGTTAGTTCACCTTTTTGTTTTGATGATTAGAGGAGGGTGTAGCTTGGAAGAAAAGGCTAAAATGGCACAAAATGCGGGCTACACAGCTGCAATTGTCTATGACAATGAAGATGGTGGTGTCCTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATACGTTGTATTTGTATTAAAAACTTCGGTGATGGACAAGAATTCTTCACCTCATATGATGAAGTCCATGATAGCTTTGATGCAATGGGGCTGAAAGAAAACCTTCTGCGAGGCATATATACTTACGGTTTTGAGAGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTGCAAAGGTCTGGATGTGATTCAACAGGCTCAGTCAGGAACTGGGAAGATAGCAACATTTTGA 396 0.4141 MLVHLFVLMIRGGCSLEEKAKMAQNAGYTAAIVYDNEDGGVLVAMAGNSAGIRIRCICIKNFGDGQEFFTSYDEVHDSFDAMGLKENLLRGIYTYGFERPSAIQQRGIVPFCKGLDVIQQAQSGTGKIATF 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00659 131 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 64 131 - -
Car05g00659 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 130 IPR027417 -
Car05g00659 131 Gene3D - 78 131 IPR027417 -
Car05g00659 131 Gene3D - 5 77 - -
Car05g00659 131 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 77 105 IPR014014 GO:0003724
Car05g00659 131 SUPERFAMILY PA domain 7 46 IPR046450 -
Car05g00659 131 PANTHER - 64 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00659 Car-Chr5 36246330 36246795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00659 67 131 Eukaryotic Initiation Factors Gene Family AT3G13920 90.769 1.26e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00659 K03257 - cam:105852033 157.918