Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00653 ATGGAGGAACATAAACCTATGACCACAATTTGTGAACAAGATCAACACATGGTTGCTGCAGCTCAAAACATTTTAAAGGGACTAGCTTCAAGCAAGAGTATCTCTAATGAGTTGAGAAAAACACTTTTGGATCTTGAGATTCAATTGTCTACAATGTCCACAATCAATGAAAGAAAAGGAAATGGTATCAAGCTATTAGAGAGAGAGCTTCAATTTGTTGAAGATAGGGTCAAAAGTTTGGAGACCAATCATATTTCCATGGCATCTTCTTCTGAGTATTTAAAACTTGTTGGGGAAATTCAAACATTAACTCAAACTTTGCAACAAAACTTTTGTTCTGTGAATGAAAAATGGAAGCATAAGGAACTTGTTCAAAGAGCTAATGAAGTTATGCAGGTTGTTATGTCAAAGCTTGAGGAAGAGTTAGTCCAAATTCTTGTTCAAAATAAGCAATATTTTGAGCTTGATTACATGCTTTTTCATTCCAATAGCGTGGATATGGTTTATGATGAATCGTATGTTTCAATCGAGGATGAACAAATCAATGAGACGTCGCGGAGTAGTGATGATGGAACTATAGATTTGGTGAATCCTTCTGTACTTGAAGATCTCAAAAGCATTGCTAAAGCCATGTTTGGTTCAAATTACCATAAGGAGTTTTGTCATGTTTTCATTGCTTCTAGAAAATATGCCTTAGATGAGTACTTTGTCATTCTAGAAATCGAAAAACTAAGCATTGAGAATGTTCTAAATATGGAATGGTATAGTTTGAATCGTCGGATAAAGAAATGGATCCAGGCCATGAAGATCATTGTTCAGGTGTATCTTGTCAGCGAAAAACGATTATGTAAGCAAGTTCTTGGAAACTTCGGATCGGTTTATCAGATTTGCTTCTCCGAAATATCAAGGTGTTCAATTTTCCACCTTTTGAATTTTGGGGAGGCCATAGCAATGAGAACACACACAACAGAAAATTTGTTTTGCTTACTTGACATGTATGAGGTTTTAGACCATGTTGCAATGGATATAGATATTTTGTTCATTGAAGAAGTAGATTCTTTTGTAAGAGAAGAGTTTCACAAGCTTCTAAGAAACTTTGGTGATTCTATAAAATCAACATTTCTTGCATTTAGATATGCTATTGCAACAAATCCATCAAACAAGTGTTTTCCTCAAGGAGGTGTTCACCATCTTACAAGATATGTCATGAATTACATCAAGGCACTTGTTGAATATGGTGACAGCCTCAATCTTCTTCTTATAGACGAAGTTTCGACCGATCCAACGGCTAGCAATGACAACAGTGAAAACTCTAATCTCTCATATTGTTCATTAGCTTGCAACTTAAGGCAAATCACTACAACTCTAGAATCCAACTTGTGCAACAAGTCAAAGTTATACACAAATGAAGCTTTGCAGCATATTTTCATGATGAATAACATTCATTACATGGTGCAAAAGGTTAAGCATTCTAACTTATGCAATTTCTTTGGAGATTATTGGCTTCGCCGACGCGTTGGCATGTTTCAAAACTATGCTAGAAGCTACGAGAAAGTGACTTGGAGTTCAATACTTTCTATGCTTAGTGATGAAAGTGTGTCAACTTGTGGCACAAAAAGAACACTAAAGAAAAAATGCAAAGATTTTAGTGTTGCTTTTTGTGAAGTTTACAAAACACAGACCGGATGGAGTGTAGTAGATACCGAACTTCGAGAAGATTTACAGATATCAGTTTCTCAGAAAGTGATTCATGCTTACCGCAGTTTTACCGGTAGAAACTCCTCTGACATTGATGAGAAATGGATCAAGTATTCAGTAGATGATCTGCAATGTTGTATTTTGGATCTTTTCCAAGGTTCATCAAAATCTTTGCACCATTCTTAG 1884 0.3562 MEEHKPMTTICEQDQHMVAAAQNILKGLASSKSISNELRKTLLDLEIQLSTMSTINERKGNGIKLLERELQFVEDRVKSLETNHISMASSSEYLKLVGEIQTLTQTLQQNFCSVNEKWKHKELVQRANEVMQVVMSKLEEELVQILVQNKQYFELDYMLFHSNSVDMVYDESYVSIEDEQINETSRSSDDGTIDLVNPSVLEDLKSIAKAMFGSNYHKEFCHVFIASRKYALDEYFVILEIEKLSIENVLNMEWYSLNRRIKKWIQAMKIIVQVYLVSEKRLCKQVLGNFGSVYQICFSEISRCSIFHLLNFGEAIAMRTHTTENLFCLLDMYEVLDHVAMDIDILFIEEVDSFVREEFHKLLRNFGDSIKSTFLAFRYAIATNPSNKCFPQGGVHHLTRYVMNYIKALVEYGDSLNLLLIDEVSTDPTASNDNSENSNLSYCSLACNLRQITTTLESNLCNKSKLYTNEALQHIFMMNNIHYMVQKVKHSNLCNFFGDYWLRRRVGMFQNYARSYEKVTWSSILSMLSDESVSTCGTKRTLKKKCKDFSVAFCEVYKTQTGWSVVDTELREDLQISVSQKVIHAYRSFTGRNSSDIDEKWIKYSVDDLQCCILDLFQGSSKSLHHS 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00653 627 Coils Coil 63 83 - -
Car05g00653 627 PANTHER EXOCYST COMPLEX COMPONENT EXO70E2 23 623 - -
Car05g00653 627 Gene3D Exocyst complex component Exo70 73 626 - -
Car05g00653 627 PANTHER EXOCYST COMPLEX PROTEIN EXO70 23 623 IPR004140 GO:0000145|GO:0006887
Car05g00653 627 Pfam Exo70 exocyst complex subunit 262 614 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car05g00653 627 SUPERFAMILY Cullin repeat-like 78 617 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00653 Car-Chr5 35828462 35830673 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00653 1 618 EXO70 exocyst subunit family AT5G61010 41.521 9.91e-163 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00653 K07195 - gmx:100791622 814.683