Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00641 | ATGGAGAACCAACATTATCATGCAATAAGAGCAACGGGAGTAACCGGAGAAGTCAATCTTGTACCATGGAGTGTTGTTTCTTATAGTACTGTACGAGACGGGTATTTTATTCTTGATGAAAACAACATCAATGCTATTAGGGAGGTTTCAATGACAAGAACAAATTTTGAAACTGCTCACAATCTTCAAAGAATAGAAATCGAAGAAGGAACGATAGATTTTGAAGAAATGACATGTTCTATATGTCTTATGGAGTTAATGGTTGGGTCAAAAGTAGTTATGTTGTCTTGTTCTCATATCTATCACGACCATTGCATTATAATGTGGCTAGATAGATCTAATACGTGCCCTTTGTGTCGTGGGTCTATTTCATGA | 375 | 0.3627 | MENQHYHAIRATGVTGEVNLVPWSVVSYSTVRDGYFILDENNINAIREVSMTRTNFETAHNLQRIEIEEGTIDFEEMTCSICLMELMVGSKVVMLSCSHIYHDHCIIMWLDRSNTCPLCRGSIS | 124 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00641 | 124 | ProSiteProfiles | Zinc finger RING-type profile. | 79 | 120 | IPR001841 | - | |
Car05g00641 | 124 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 55 | 124 | IPR013083 | - | |
Car05g00641 | 124 | CDD | RING-H2_PA-TM-RING | 78 | 120 | - | - | |
Car05g00641 | 124 | SMART | ring_2 | 79 | 119 | IPR001841 | - | |
Car05g00641 | 124 | SUPERFAMILY | RING/U-box | 71 | 123 | - | - | |
Car05g00641 | 124 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 53 | 120 | - | - | |
Car05g00641 | 124 | Pfam | Ring finger domain | 78 | 120 | IPR001841 | - | |
Car05g00641 | 124 | PANTHER | ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN | 53 | 120 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g00641 | Car-Chr5 | 35432552 | 35432926 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g00641 | 62 | 123 | C3H Transcription Factor Family | AT4G12190 | 43.939 | 3.10e-14 | 61.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00641 | - | K22378 | cam:101490108 | 87.0409 |