Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00621 ATGGAAGAAAACATACGTGCACCATTTTCTCTCTCTCCATTAGAGAACAGACCTGTGAGATTTTCCACACTCCCAGGTATCTCCTCCATGACAGTGGAAGCTAAGAGAGGGTACATGGATTCTCACACCACCAACATCACCAACGAAAAGTTGATGATGCCACCACCAACACAATCCTCCTCTTTTAGGCAAATTGATCCCCTTCAAGAGCCAACGACAGATGATATTACTGCATCATCTTCTATGAACAATCCCAAACCACCTGTTGACACCCTCATAGAACCAATTCTCATTGAGATCTCTGCTGGAGAAGATATTGTGGAGACTCTCATCAACTTGGCTCGTTATCATCAAGTTGGGATCATAGTGTTGAGTGGTTCTGGTCCTGTATATGATGTTACTCTCCTTCACCCTATGTCTAATTCCCCTGCTTTCCCCATCCAAGGACCATTCAATATGTTATCTCTATCTGGCACTTACATTAATCCCAATTGTGAACATGTACCTCCTCGATTCATCACCCACCCAGCATGTTCCTCATTTTCCATTTTCCTCGATGGCAGTCATAACCAGGTGTTTGGTGGAATTATTGGAGGGAAGGTTACGGCTGCTGGTGTTGTTTTGGTTACAGCCGCTCTTATTAAGAAATTTGAGTTTCATCAATTGATCGAAAGAAATAGAAAAGTTTGGCAATTTGAAGATGATGACCCAACATATATTGGTGGTGTCATATTCCCTAATGTTGATCATGTTGCACCTGAACACAATAACAACAATGTCTTTCAGGCCTCAGGATCCGGTGTTGTCAGTGCTAATCAAACTCAGATGAATAACCAAATGCTTCCTCCTCCTCTTCCAACGAATTTTAATGTCGTTTTCTGA 882 0.4218 MEENIRAPFSLSPLENRPVRFSTLPGISSMTVEAKRGYMDSHTTNITNEKLMMPPPTQSSSFRQIDPLQEPTTDDITASSSMNNPKPPVDTLIEPILIEISAGEDIVETLINLARYHQVGIIVLSGSGPVYDVTLLHPMSNSPAFPIQGPFNMLSLSGTYINPNCEHVPPRFITHPACSSFSIFLDGSHNQVFGGIIGGKVTAAGVVLVTAALIKKFEFHQLIERNRKVWQFEDDDPTYIGGVIFPNVDHVAPEHNNNNVFQASGSGVVSANQTQMNNQMLPPPLPTNFNVVF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00621 293 ProSiteProfiles PPC domain profile profile. 90 233 IPR005175 -
Car05g00621 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 227 - -
Car05g00621 293 CDD DUF296 95 209 IPR005175 -
Car05g00621 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 80 280 IPR014476 GO:0003680
Car05g00621 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 213 IPR005175 -
Car05g00621 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 80 280 - -
Car05g00621 293 Gene3D - 93 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00621 Car-Chr5 34078190 34079071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00621 81 242 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.196 3.67e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00621 - - cam:101511090 282.337