Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00557 ATGTCAGGACCTGTACCTTCTGGGAATGGATCTTTTAAGAAGAAAGCAATCAATGCCTCAAGCATTCTCAGGAATTCGTTGACAAGAAAGGGTAGGCGAAGTAGCAAGGTGATGTCCGTCGAAATTGAGGATGTTCACGATGCTAAGGAGTTGAAAGCTGTTGAGGAGTTCCGTCAAGCGCTTATATCAGACGAACTTCTCCCTGCAAAACATGACGACTATCATATGCTCCTTATGTCACTTTTTCTTCTTCTGTGTTTAGTCTATCATATGATTCACAATTTTAGATGCTTGGTTGGCCGGGCTGGAAGGTTTGGCACCAAGGATCTTGCAATTACATTTGTTTCATGTTCAACTGATATGGATGTTCTCAACAATGTATGA 384 0.4167 MSGPVPSGNGSFKKKAINASSILRNSLTRKGRRSSKVMSVEIEDVHDAKELKAVEEFRQALISDELLPAKHDDYHMLLMSLFLLLCLVYHMIHNFRCLVGRAGRFGTKDLAITFVSCSTDMDVLNNV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00557 127 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 79 - -
Car05g00557 127 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 10 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00557 Car-Chr5 27855724 27857501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00557 99 127 Eukaryotic Initiation Factors Gene Family AT5G11170 72.414 1.37e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00557 - - gmx:100527533 124.79