Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00556 ATGTCAAGACTTGTACCTTTTGGGAATGGATCTTTTAAGAAGAAAGCAATCAATGCCTCAAGCATTCTCAGGAATTCGTTGACAAGAAAGGGTAGGCGAAGTAGCAAGGTGATGTCCGTCGAAATTGAGGATGTTCACGATGCTGAGGAGTTGAAAGCTGTTGAGGAGTTCCGTCAAGCGCTTATATCGGACGAACTTCTCCCTGAAAAACATGACGACTATCATATGCTACTTAGGTCACTTTTTCTTCTTCTGTGTTTAGTTTATCATATGATTCACAAATTTGTTGGACATCTGGTTGGCCGGGCTGGAAGGTTTGGCACCAAAGGTCTTGCAATTACATTTGTTTCATGTTCAACTGATATGGATGTTCTCAACAATGTATGA 387 0.4109 MSRLVPFGNGSFKKKAINASSILRNSLTRKGRRSSKVMSVEIEDVHDAEELKAVEEFRQALISDELLPEKHDDYHMLLRSLFLLLCLVYHMIHKFVGHLVGRAGRFGTKGLAITFVSCSTDMDVLNNV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00556 128 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 81 - -
Car05g00556 128 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 10 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00556 Car-Chr5 27842646 27843976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00556 98 128 Eukaryotic Initiation Factors Gene Family AT5G11170 74.194 2.54e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00556 - - gmx:100796901 124.405