Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00540 ATGTGGTTGAATTCAATTAATCAGGCATTCAATGCCGAGGCAAGTGCTTTGTCGGAATCACTAAAATCTCCGGCGAGTGATAAATTATCCCGCTCTTCGACCCCGCAGTTAAAACAAGGAGCAAGGTTAGTGGATGATGGGGATTGCCATGAGCAGACTACTAATTGCTCAATAGAAAAAGAAAGTGTGGAACATGATGGTGAATGTAAATCTGTTGAAACTTCATATGAAAATTTAAATGTGGAAAGTTCTCCTCAATCAAGGAAACTTGAGGAGACTCTGACTAAGGAGGAAGAGGATTTTGCTAATGATTCCAAGGGTGTTTCACTGAATCCACAAAATAAAAAGTTTGGCAATACGTCTTCAATTAAATCAGGTGCTCTTAACGATTCATGTGAGAATAAAGCTACTCGGAAGAAGATGAAAGTAGACTGGACACCTGAGCTGCACAAAAAGTTTGTGAAGGCGGTGGAACAACTAGAAATATAA 489 0.3947 MWLNSINQAFNAEASALSESLKSPASDKLSRSSTPQLKQGARLVDDGDCHEQTTNCSIEKESVEHDGECKSVETSYENLNVESSPQSRKLEETLTKEEEDFANDSKGVSLNPQNKKFGNTSSIKSGALNDSCENKATRKKMKVDWTPELHKKFVKAVEQLEI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00540 162 MobiDBLite consensus disorder prediction 106 128 - -
Car05g00540 162 PANTHER TRANSCRIPTION ACTIVATOR GLK1 23 162 IPR044825 GO:0003700|GO:0045893
Car05g00540 162 PANTHER TWO-COMPONENT RESPONSE REGULATOR-APRR2-LIKE PROTEIN 23 162 - -
Car05g00540 162 Gene3D - 136 162 - -
Car05g00540 162 MobiDBLite consensus disorder prediction 89 104 - -
Car05g00540 162 MobiDBLite consensus disorder prediction 76 128 - -
Car05g00540 162 MobiDBLite consensus disorder prediction 14 39 - -
Car05g00540 162 MobiDBLite consensus disorder prediction 14 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00540 Car-Chr5 26310730 26311828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00540 1 162 Response Regulator Gene Family AT4G18020 37.306 2.49e-17 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car05g00540 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00540 - - gmx:100779121 198.749