Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00521 ATGGCGCATAACGACTCAAACTCCGATCCCAATCCCCAAGCCCGATTCTACAACCCATACAAAGACCTCGATATTCCTATTCAAAATCTCTACAAACTCTCAACCTCACCGGAGTTTCTCTTCGACGAAGAAGCTCGCCGTAAACGCAGTTCATGGGGAGAAAATCTCACATTCTACACCGGTTGCGGTTGCCTCGGTGGTTCAATCGCCGGTGTCGGACTCGTCGACGACGTTAAAGCCTTCGAGTCCAGCGACACCGCGAAGCTTCAGATGACTACCTCATGTCCCGGCATTGTTGGTGGATTGTTTCTTCCTGTACTCGGTGCTCTCCCTGATGCAATGCTCATTCTCGTTACTAATCTGAAGTTCTATTTGGTGTCCTACAAAGCTGTTACGAATGATGGTGAATTTATTGCTGTCAAGAAGCTGAATTCGCGCGGAGGAGCATCGAGCATCGACCGAAGCATCTTAGCTGAGATTTCAACTCTTGGAAAGACCAGGCACATGAACATTGTGAAGTTGCATGAATTCTGTTTTCATGAAGATTCTAATCTTTTATCATAG 564 0.4681 MAHNDSNSDPNPQARFYNPYKDLDIPIQNLYKLSTSPEFLFDEEARRKRSSWGENLTFYTGCGCLGGSIAGVGLVDDVKAFESSDTAKLQMTTSCPGIVGGLFLPVLGALPDAMLILVTNLKFYLVSYKAVTNDGEFIAVKKLNSRGGASSIDRSILAEISTLGKTRHMNIVKLHEFCFHEDSNLLS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00521 187 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-2-LIKE 3 92 - -
Car05g00521 187 PANTHER TIM23 3 92 IPR045238 GO:0022857
Car05g00521 187 SUPERFAMILY Protein kinase-like (PK-like) 128 183 IPR011009 -
Car05g00521 187 Gene3D Phosphorylase Kinase; domain 1 118 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00521 Car-Chr5 25106541 25108130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00521 2 91 Chloroplast and Mitochondria Gene Families AT1G72750 57.895 4.38e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car05g00521 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00521 K17794 - gmx:100813158 130.183