Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00497 ATGCTGCTAGAGAAATTTCTCAACGTTGTCCAAACAGTGTATCAGCTGCTATGTTTTATGACATGTGTATATAATGATGGGTGTGGAGAGTGTTTGAAGGATTTGATAGATATGGTTAGTAAGTGTTGTGGGAGTAAGGAAACATGGGCTATTGTTGCTCCAAGTTGTGAATTGCTGTTGAGGACCATTCCTAGAGCTTTTCATGATCATGTTCAAAGAGAGGATTCATTGAATGGAGTCCTTCAAACAATCCCTTTAATTGATTCTCAACTAAGAGTTATCCATATAGATTTGAAAGCTAGTAATGTTCTTTTGGACGACGAAATGAGTCCAAAAATATCAGATTTTGGATTAACAAGAAAGTTTGAAAAATGA 375 0.3573 MLLEKFLNVVQTVYQLLCFMTCVYNDGCGECLKDLIDMVSKCCGSKETWAIVAPSCELLLRTIPRAFHDHVQREDSLNGVLQTIPLIDSQLRVIHIDLKASNVLLDDEMSPKISDFGLTRKFEK 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00497 124 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 58 - -
Car05g00497 124 PANTHER PROTEIN KINASE DOMAIN 16 58 - -
Car05g00497 124 PANTHER PROTEIN KINASE DOMAIN 88 124 - -
Car05g00497 124 Pfam Protein kinase domain 50 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00497 124 SUPERFAMILY Protein kinase-like (PK-like) 35 122 IPR011009 -
Car05g00497 124 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 88 124 - -
Car05g00497 124 Gene3D Transferase(Phosphotransferase) domain 1 35 124 - -
Car05g00497 124 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00497 124 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00497 Car-Chr5 24439330 24440280 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00497 57 123 Receptor kinase-like Gene Family AT4G23290 46.377 4.11e-12 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car05g00497 Pkinase 4.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00497 - - mtr:MTR_8g041820 65.855