Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00473 ATGCGCCTAAACACAAATCCTTATGCCTCAGCGACTCTAACAGCTATAGATCCGGCGAATTCACCACCACTTCTTCACAATCCCGACGACTCCTCATCTCATGTGCTTTCGAAAATTCCAATGATTTCATCCGTCAACTTGTTTCCGATATTCACTCTTCTTCAATCAAAGACCAGTAACAAGCCGCCATGGAAATTCGACACCACCACACGTATTGGAGCTGAAACAGCTAAGGTGTTAGCAAAGAGAGGAGTCTCTCTTGCTTCTGTACAGAGATTTTGTTCAGAGTTTTTAGCTTTAGAATTGCCTTATAATATTATCATAAATAATGCAGGAGTATACTCTCAGAACATTGAATTCCCTGAAGAGAAAATTGAAATGACATTTGCTATAAATTACAAGCTGAGGGTGGCAGTTTTAGTTTCCAAAGTAGCATTTCAGTTTCTGCAAGACGCGCAACAAAGCGATTACAAAGTGCTAGAGGAAGTTAAAGATTCAGGATTCCAAATCTGTGGTGATGAATTGGGGTCTATTGTTGAAGGCCATGATGATGATCTGACAATGAAATCTTTGGCCAGAGACGGTGAATATAGTAATCATTCAAGTGATTTGGTTCTGTTAATTCATATAAATCTTTTTGGGTTAATCCTGATTATTAATATGATTACTATCTTTTATGTATACTCAAACTTGTGA 696 0.3793 MRLNTNPYASATLTAIDPANSPPLLHNPDDSSSHVLSKIPMISSVNLFPIFTLLQSKTSNKPPWKFDTTTRIGAETAKVLAKRGVSLASVQRFCSEFLALELPYNIIINNAGVYSQNIEFPEEKIEMTFAINYKLRVAVLVSKVAFQFLQDAQQSDYKVLEEVKDSGFQICGDELGSIVEGHDDDLTMKSLARDGEYSNHSSDLVLLIHINLFGLILIINMITIFYVYSNL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00473 231 PANTHER RETINOL DEHYDROGENASE 86 145 - -
Car05g00473 231 Gene3D - 55 160 - -
Car05g00473 231 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 86 145 - -
Car05g00473 231 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 70 134 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00473 Car-Chr5 23508463 23510315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00473 114 183 Primary Pumps ATPases AT2G22950 57.143 9.26e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00473 - - cam:101507087 207.608