Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00466 ATGGATGGTCTTATACAACAGATCTTATACTTACAGAGGCTAGATCCTGAAGATGAGATGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAGCACTGGGCCCAACAATTGCTGCAAACAACTTCAGAGACATATGGTTTTATCTCATAGCTCCTATTCTTGGAGCTCTAATTGGGGCAGGTGCATACATTGTTGTCAAATTGCCTGATGAAGAATTTAACTGA 225 0.4133 MDGLIQQILYLQRLDPEDEMPATGGSMNPVRALGPTIAANNFRDIWFYLIAPILGALIGAGAYIVVKLPDEEFN 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00466 74 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 21 74 - -
Car05g00466 74 PANTHER AQUAPORIN NIP2-1 21 74 IPR034294 -
Car05g00466 74 SUPERFAMILY Aquaporin-like 21 72 IPR023271 -
Car05g00466 74 Gene3D Glycerol uptake facilitator protein. 19 72 IPR023271 -
Car05g00466 74 Pfam Major intrinsic protein 20 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00466 Car-Chr5 23087513 23089464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00466 21 72 Major Intrinsic Protein MIP AT1G80760 75.000 2.15e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00466 K09874 - cam:101515590 84.7297