Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g00466 | ATGGATGGTCTTATACAACAGATCTTATACTTACAGAGGCTAGATCCTGAAGATGAGATGCCTGCAACTGGAGGTTCAATGAATCCAGTAAGAGCACTGGGCCCAACAATTGCTGCAAACAACTTCAGAGACATATGGTTTTATCTCATAGCTCCTATTCTTGGAGCTCTAATTGGGGCAGGTGCATACATTGTTGTCAAATTGCCTGATGAAGAATTTAACTGA | 225 | 0.4133 | MDGLIQQILYLQRLDPEDEMPATGGSMNPVRALGPTIAANNFRDIWFYLIAPILGALIGAGAYIVVKLPDEEFN | 74 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g00466 | 74 | PANTHER | MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER | 21 | 74 | - | - | |
Car05g00466 | 74 | PANTHER | AQUAPORIN NIP2-1 | 21 | 74 | IPR034294 | - | |
Car05g00466 | 74 | SUPERFAMILY | Aquaporin-like | 21 | 72 | IPR023271 | - | |
Car05g00466 | 74 | Gene3D | Glycerol uptake facilitator protein. | 19 | 72 | IPR023271 | - | |
Car05g00466 | 74 | Pfam | Major intrinsic protein | 20 | 63 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g00466 | Car-Chr5 | 23087513 | 23089464 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g00466 | 21 | 72 | Major Intrinsic Protein MIP | AT1G80760 | 75.000 | 2.15e-22 | 85.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g00466 | K09874 | - | cam:101515590 | 84.7297 |