Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00464 ATGAATGGTGGAGTGACGGTTCCTTCAGTAGCAATTGGTGAAGCTTTTGCATTAGAATTAATTATTGACTTTAATCTCACTGTTGTTGCCACCGACACAAGAGCTATGGGAGAATTTGCGGGAATCACGGTGGGAGCCACCATCATGCTCAACATACTCATAGCCGGAGTGTCTTGTGCTTTGCCATTGCCACCTGCTCCTATCCCTCTTGCTAAAAAGGTTGCAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATGGGAAGTGCAATAGAGAACGAAAAGGTTGAAAATTCAGAGACACTAATTGGATGTGCTGGAGCTAGTGGACTTGCTGTTATGATCATAATTCTATCAACTGGTCATATCTCCGGTGCTCATCTCAATCCTGCTATTACCATCTCATTTGCTGCATTGAAGCATTTTCCTTGGAAGAATGTACCTGTGTATATTGGTGCACAAATATTGGCATCAATATGTGCTGCATTTTCTCTGAAAGTGATTTTTCATCCATTCATGAATGGTGGAGTGACGGTTCCTTCAGTAGCAATTGGTGAAGCTTTTGCATTAAAATTCATTATTGGCTTTAATCTCATGTTTGTTGTCACTGATGTTGCCACCGACACAAGAGCTATGGACAATGTAATTTCACAAGCACAAGCAACACTAAGGGCACCTGTCTTCCAGCGTTCTAACATTCAGTGGTATCAATTAAAAGCTCAGCAACATCAGCAGTCTCATGTCTCTTATTATCATGGATTTTGGCATTTTAATAATTTTCTTTTTGGTCATTCACATATTGTACTATGA 816 0.402 MNGGVTVPSVAIGEAFALELIIDFNLTVVATDTRAMGEFAGITVGATIMLNILIAGVSCALPLPPAPIPLAKKVAAEFIGTFILMFAGMGSAIENEKVENSETLIGCAGASGLAVMIIILSTGHISGAHLNPAITISFAALKHFPWKNVPVYIGAQILASICAAFSLKVIFHPFMNGGVTVPSVAIGEAFALKFIIGFNLMFVVTDVATDTRAMDNVISQAQATLRAPVFQRSNIQWYQLKAQQHQQSHVSYYHGFWHFNNFLFGHSHIVL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00464 271 Pfam Major intrinsic protein 70 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00464 271 SUPERFAMILY Aquaporin-like 69 214 IPR023271 -
Car05g00464 271 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00464 271 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00464 271 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00464 271 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00464 271 PANTHER BNAA02G36290D PROTEIN 1 56 - -
Car05g00464 271 PANTHER BNAA02G36290D PROTEIN 57 219 - -
Car05g00464 271 PANTHER AQUAPORIN NIP2-1 1 56 IPR034294 -
Car05g00464 271 PANTHER AQUAPORIN NIP2-1 57 219 IPR034294 -
Car05g00464 271 Gene3D Glycerol uptake facilitator protein. 65 226 IPR023271 -
Car05g00464 271 ProSitePatterns MIP family signature. 129 137 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00464 Car-Chr5 23036090 23042446 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00464 1 65 Major Intrinsic Protein MIP AT1G80760 63.768 1.19e-18 82.0