Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00462 ATGTGCAACACCTGGTGCCCCTCTTTTAGTAGCATAAGGTATGAGAAAAATGGGAATCGTTCTGTTGGTAGAAAGAAATCACTTCTCAAGAATATGAATTGTTTTACTATTGAAGAATGGAATTTGGAAGATGGTTATTTACCTAGAGTGTCTTGTGCTTTGCCATTGCCACATGCTCCTATCCCTCTTGCTAAAAAGGTTGCAGCAGAGTTTATAGGCACATTCATTCTAATGTTTGCTGGAATGGGAAGTGCAATAGAGAACGAAAAGGTTGAAAATTCAGAGACACTAATTGGATGTGTTGGAGCTAGTGGACTTGCTGTTATGATCATAATTCTATCAACTGGTTATATCTCCGGTGCTCATCTCAATCCTGCTGTTACCATCTCATTTGTACCTGTGTATATTGGTGCACAAATATTGGCATCAATATGTGCTGCATTTTCTCTGAAAGTGATTTTTCATCCATTCATGAATGGTGGAGTGACGGTTCCTTCAGTAGCAATTGGTGAAGCTTTTGCATTAGAATTCATTATTGGCTTTAATCTCATGTTTGTTGTCACTGATGTTGCCACCGACACAAGAGCTATGGGAGAATTTGCGGGAATCACGGTGGGAGCCACCATCATGCACAACATACTCATAGCCGGGTATGTTCAACGTTATTATTTTTAA 675 0.3956 MCNTWCPSFSSIRYEKNGNRSVGRKKSLLKNMNCFTIEEWNLEDGYLPRVSCALPLPHAPIPLAKKVAAEFIGTFILMFAGMGSAIENEKVENSETLIGCVGASGLAVMIIILSTGYISGAHLNPAVTISFVPVYIGAQILASICAAFSLKVIFHPFMNGGVTVPSVAIGEAFALEFIIGFNLMFVVTDVATDTRAMGEFAGITVGATIMHNILIAGYVQRYYF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00462 224 PRINTS Major intrinsic protein family signature 65 84 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00462 224 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00462 224 PRINTS Major intrinsic protein family signature 104 128 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car05g00462 224 ProSitePatterns MIP family signature. 122 130 IPR022357 -
Car05g00462 224 PANTHER AQUAPORIN NIP2-1 15 218 IPR034294 -
Car05g00462 224 PANTHER BNAA02G36290D PROTEIN 15 218 - -
Car05g00462 224 Gene3D Glycerol uptake facilitator protein. 58 224 IPR023271 -
Car05g00462 224 SUPERFAMILY Aquaporin-like 61 220 IPR023271 -
Car05g00462 224 Pfam Major intrinsic protein 63 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00462 Car-Chr5 23019813 23020895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00462 6 217 Major Intrinsic Protein MIP AT1G80760 60.090 4.18e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00462 K09874 - gmx:100798410 280.411