Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00458 ATGAACAAATCAATTTGTTCATTACTTCTTATATCCTTTCTCACTATCACTTTCTTAGTGGGTGAAACCCATGGAACTAAACAAAGTAGAGCTCTTGACAAATTACAAAAGTCCAAGTTCAATGCAAATTCAAAAATTGACAAGAGTCACTTTAAGACACAAAAGAATAATATTGTGGTTGATGAAGTGGTTCATTCTCAAGATGGTATGAAAGAGAAAGACATGATTGTGAAACTACCAGGACAACCAAATGTGAAATTCTCTCAATATGGAGGGTATGTCACTGTGGACAAATTAGTAGGACGTGCCTTTTACTATTACTTTGTGGAAGCTCATCATTCTAAAGAAACATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGCTCATCTCTTGCCTATGGAGCAATGGAAGAACTTGGACCCTTCCGTGTGAACAGTGATGGGAAAACCCTTCACAAAAATAACTATTCATGGAACTATGCTGCAAATGTTTTGTTCCTTGAGTCACCAGCTGGCGTAGGATTTTCATACTCAAACAAAACATTTGATTATGACACTAATGGAGATAGAAGAACAGCTAGGGACAACTATGTGTTTTTATTGAATTGGTTAGAGAGGTTTCCTGAGTATAAAAATAGAGACTTCTATATTGCTGGTGAAAGCTATGCTGGTCATTATGTCCCTCAACTTGCACACAATATTCTCTACTATAACAAAAAGGCTAATAGGACAATTGTTAACCTCAAAGGAATAATGATTGGGAATGCAGTGATAAATGATGAAACAGATAATCAAGGAATGTATGATTATCTTGCTAGCCATGCAATCATATCAGACCAAACAGCACATAATATCAACACATTTTGTAATTTCTCATCAACTTCTAATCAGAGTACTGAATGCAATGAAGCAGCAAGTGAAGTTTATAGGAATACATTGTTCCTTGATGTGTACAACATTTATGCTCCAATTTGCACTAATCACAACCTCACTACGCTATCAAAGAAGATCTCGGTTGCTCTTGATCCCTGCAGCGATGATTATGTACAAGCATATTTGAACAGGGATGATGTTCAAGAGGCCCTCCATGCCAATGTCACCAAGCTCAAATATGATTGGGAGCCTTGCAGTAGTATCATTTCAAAATGGGGGGATAGTCCTTCAACAATCATTCCCCTTTTACATGAGTTCCTCAATAATGGACTAAGGGTGTGGGTTTTTAGTGGTGATATAGATGGAAGGGTGCCTGTTACTTCAACTAAATATTCCATTAAAAAGATGAAGCTTCCCATTGAAACTACTTGGTATCCTTGGTTCTTAAATGGACAGGTTGGTGGCTATGCTGAAGTATACAAGGGAGGTCTAACTTTTGCCACAGTGAGAGAAGCAGGACATCAAGTACCAAGCTACCAACCAGCAAGAGCCCTCTCTCTAATCAAGCATTTCTTAAATGGCACTCCTCTTCCTAATACTCAAACATTATTTGACTAA 1497 0.3788 MNKSICSLLLISFLTITFLVGETHGTKQSRALDKLQKSKFNANSKIDKSHFKTQKNNIVVDEVVHSQDGMKEKDMIVKLPGQPNVKFSQYGGYVTVDKLVGRAFYYYFVEAHHSKETLPLLLWLNGGPGCSSLAYGAMEELGPFRVNSDGKTLHKNNYSWNYAANVLFLESPAGVGFSYSNKTFDYDTNGDRRTARDNYVFLLNWLERFPEYKNRDFYIAGESYAGHYVPQLAHNILYYNKKANRTIVNLKGIMIGNAVINDETDNQGMYDYLASHAIISDQTAHNINTFCNFSSTSNQSTECNEAASEVYRNTLFLDVYNIYAPICTNHNLTTLSKKISVALDPCSDDYVQAYLNRDDVQEALHANVTKLKYDWEPCSSIISKWGDSPSTIIPLLHEFLNNGLRVWVFSGDIDGRVPVTSTKYSIKKMKLPIETTWYPWFLNGQVGGYAEVYKGGLTFATVREAGHQVPSYQPARALSLIKHFLNGTPLPNTQTLFD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00458 498 Gene3D - 392 487 - -
Car05g00458 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 491 IPR001563 GO:0004185|GO:0006508
Car05g00458 498 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Car05g00458 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Car05g00458 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Car05g00458 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Car05g00458 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Car05g00458 498 SUPERFAMILY alpha/beta-Hydrolases 78 491 IPR029058 -
Car05g00458 498 Gene3D - 346 382 - -
Car05g00458 498 PANTHER CARBOXYPEPTIDASE 10 491 - -
Car05g00458 498 Gene3D alpha/beta hydrolase 70 329 IPR029058 -
Car05g00458 498 Pfam Serine carboxypeptidase 81 487 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00458 Car-Chr5 22881388 22892094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00458 354 490 Calmodulin-binding Proteins AT2G22960 32.117 7.09e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00458 K16297 - gmx:100783864 720.309