Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00447 ATGTCTCTTTGTCGCGCTGTCGTCGCTCCACTACAGCACCACCGCACCGCTGCTCAGTGCAATATTGTCGCACCTCTGCAACACGCTGCACTGCTACATCATCGTCGCACCGTTGTGCCAGAAAGTAATGACAATAGTCAACCACACATAGAAATGAAGTTTGAATATGAGGCGATGATTTACGAATTTTATAATGAATACAGTAAAAGAATTGGATTTGGGGAGCATAGAGCAGAAACTAGAACAGGATGTAAAGCACATATGGTTATTTCACTTGATCAGAAGATTGAGAAATATAAAGTTGTTGACTTTGTAGCTCAACATAACCACCTACTTCAGCCGCCAGAGTATGTTCATATGATTCATTCTCATCAACATATATCTGAGGCACAAACATCACAAATCGTATTGGAAGATGAGTCTGGATTGAGGCCAAAATATTTTCATGAATATATGTCCATGCAAGTCGGTGGAATAGAGATTGTTGGTTTTACAAGACAAGACCTTAAGAATTATCTTCGAACCAAAAGGAAGCAATCACTAAAGTATGGTGACTATCGCAGCTTAAAATTTCGAGTGTTTCTCGAATTCAATGGAGCCGCCACCAAAATTTATTTTCAAATAGGGAAAATATTGGGAAATCCTTAA 648 0.392 MSLCRAVVAPLQHHRTAAQCNIVAPLQHAALLHHRRTVVPESNDNSQPHIEMKFEYEAMIYEFYNEYSKRIGFGEHRAETRTGCKAHMVISLDQKIEKYKVVDFVAQHNHLLQPPEYVHMIHSHQHISEAQTSQIVLEDESGLRPKYFHEYMSMQVGGIEIVGFTRQDLKNYLRTKRKQSLKYGDYRSLKFRVFLEFNGAATKIYFQIGKILGNP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00447 215 Pfam FAR1 DNA-binding domain 76 113 IPR004330 -
Car05g00447 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 74 - -
Car05g00447 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 75 131 - -
Car05g00447 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 33 74 - -
Car05g00447 215 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 75 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00447 Car-Chr5 22637894 22638655 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car05g00447 FAR1 8.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00447 - - cam:101500125 251.136