Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00429 ATGGCATCATCCAGCTCTTACAATTCTCCATGTGCTGCGTGCAAATTCTTAAGGAGAAAATGCATGCAAGGATGCATCTTTGCACCAGACTTCCCACCAGAAGAGCCACAAAAATTAGCAAACGTGCACAAAATATTCGGTGCTAGCAATGTGACAAAGCTTCTTAACGAACTCCTCCCTCACCAAAGAGAAGATGTAGTGAACTCATTTGCCTATGAAGCTGAAGCACGAGTGAAGGACCCAATTTATAGTTGA 255 0.4314 MASSSSYNSPCAACKFLRRKCMQGCIFAPDFPPEEPQKLANVHKIFGASNVTKLLNELLPHQREDVVNSFAYEAEARVKDPIYS 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00429 84 PANTHER PROTEIN LATERAL ORGAN BOUNDARIES 1 83 - -
Car05g00429 84 Pfam Lateral organ boundaries (LOB) domain 10 83 IPR004883 -
Car05g00429 84 ProSiteProfiles LOB domain profile. 9 84 IPR004883 -
Car05g00429 84 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00429 Car-Chr5 21365551 21365805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00429 1 84 AS2 family AT5G63090 88.235 5.83e-51 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g00429 LOB 9.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00429 - - cmos:111430134 162.54