Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00426 ATGATGTTTGTGCTGGTTTTGTATAGTGAAGCAGTAACTCGCAAGACTCGTCTTCTGGATGTGGTTTACAATGCCTCAAATAACGAGTTCGTCCGAACGCAGACTCTTGTTAAGAGTGCTATTGTTCAGGTTGATGCTGCACCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGAAATTGGTAGAAAAAAGAAATCAACTGCAACCAAGAAGGATTCTGCAGAGAGGAAACTTGAGAACCGTCAAACAGATCGTCAGCTAGATTCCCTCATTGAAGAGCAGTTTGGTGGTGGTCGTTTGCTGGCCTGGCCTGTATTTCATCTCGTCCAGGTCAATGTGGCAGGGTTGCTGGATACATCCTCGAAGGTAAAGGAACTGGAATTTTACATGAAGAAGTTACAAAGGAAGAAAGGAAATGGTGTTGCTTAA 432 0.4352 MMFVLVLYSEAVTRKTRLLDVVYNASNNEFVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKSTATKKDSAERKLENRQTDRQLDSLIEEQFGGGRLLAWPVFHLVQVNVAGLLDTSSKVKELEFYMKKLQRKKGNGVA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00426 143 Gene3D - 4 138 - -
Car05g00426 143 Pfam Ribosomal protein S8e 9 103 IPR022309 -
Car05g00426 143 PANTHER 40S RIBOSOMAL PROTEIN S8 9 143 - -
Car05g00426 143 MobiDBLite consensus disorder prediction 64 83 - -
Car05g00426 143 Gene3D Ribosomal protein S8e, subdomain 48 98 IPR042563 -
Car05g00426 143 PANTHER 40S RIBOSOMAL PROTEIN S8 9 143 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00426 Car-Chr5 21080814 21081853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00426 9 131 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 64.122 3.42e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00426 K02995 - gmx:100500112 169.474