Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00418 ATGGCCAAGAAGGGTTGGTTTAGCATGGTAAAAAAGCTCTTTACAAGGGATAAACATTCCACACAAGAGAAGAAGGAGAAAAGAAGGAAATGGGTATTTGGGAAGCTAAAGACTAAGAGTTTTCCTTCAATTGAAGCACCACCATCATTAACAGAAAGAAGATTATGTGAAGCTGAAGAAGAACACAACAAGCAGGCTTTAACAGTTGCTATTGCATCAGCTGAAGCTGCTCTTACTGCTGCTCAAGTTGCAGTTGAGGTTGTTAGGGTCCAATCTACTCATCATTGTAATGGAAAACCAGAAGAAGCTAAAACTAAGTATGATGCTTCTAAATCCACACACAAGTGCCATAGGAAGATTGAAGAATCGTCAGCCATCAAAATTCAAACAACATTTAGAGGTTACCTTGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGCGGAAGAGCTGTAAGACGGCAAGCTATGAGTACTCTGAAGTGCTTGCAGTCCATTGTGAGTATTCAGTCACAAGTCATTGCAAGGAAACTCCAAATGGTTGAAGGAAGGTGGGATTGTGGTGAATATGAAGAAATGCAAGGTTCAACAGACAAGATCATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCCTTTTATTGAAGAAAGAGGTAGATTCCTCTAGCATAAGCAAGAAAGAAGCATCTCTTAGGAGAGAAAGAGTAAAAGAATACTCATACAACCATAGAAAATCAGCTGAACCAGAAAGAAACAAAATAAATGGAAGATGGAGATATTGGATGGAGCAATGGGTAGACACCCAACATTCTAAGAGTAAAGAACTTGAAGATTTAGACTCGGAGTTTACGTCACATTGTAGAGGTGTGGAAGATTATGGAAGAAGACAAGTAAAACTTAGACATATTCAGAGACAAAATGAAGTTGAAGGATTAGAGTCTCCTATACTATCTTTAAGAAATTCTTTTTCACAATGGAGACAGAATTCAGAGAGAGAAGATCACTCATTTCCAAGCTCACCTGCAATTCCAACATACATGGCTGCAACAAAATCTACTCAAGCAAAAGTAAGATCAACAAGCACACCAAAAACAAGAATAGTAGGAGGGAATTGGGATATGAACTCTGATTGCTATTCACCATGCAAGAGAAAGCTCAGTAATAATCAGCAAGGATCTCCTAGGTTAAAGAGCCTCTCAAGGCCTTAA 1236 0.3916 MAKKGWFSMVKKLFTRDKHSTQEKKEKRRKWVFGKLKTKSFPSIEAPPSLTERRLCEAEEEHNKQALTVAIASAEAALTAAQVAVEVVRVQSTHHCNGKPEEAKTKYDASKSTHKCHRKIEESSAIKIQTTFRGYLARKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVIARKLQMVEGRWDCGEYEEMQGSTDKIIRMDSNSERRWDDSLLLKKEVDSSSISKKEASLRRERVKEYSYNHRKSAEPERNKINGRWRYWMEQWVDTQHSKSKELEDLDSEFTSHCRGVEDYGRRQVKLRHIQRQNEVEGLESPILSLRNSFSQWRQNSEREDHSFPSSPAIPTYMAATKSTQAKVRSTSTPKTRIVGGNWDMNSDCYSPCKRKLSNNQQGSPRLKSLSRP 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00418 411 MobiDBLite consensus disorder prediction 361 378 - -
Car05g00418 411 Gene3D - 119 173 - -
Car05g00418 411 SMART iq_5 120 142 IPR000048 GO:0005515
Car05g00418 411 MobiDBLite consensus disorder prediction 361 383 - -
Car05g00418 411 Pfam Protein of unknown function (DUF4005) 341 396 IPR025064 -
Car05g00418 411 PANTHER IQ-DOMAIN 11 1 407 - -
Car05g00418 411 ProSiteProfiles IQ motif profile. 121 149 IPR000048 GO:0005515
Car05g00418 411 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Car05g00418 411 Pfam IQ calmodulin-binding motif 123 142 IPR000048 GO:0005515
Car05g00418 411 MobiDBLite consensus disorder prediction 392 411 - -
Car05g00418 411 ProSiteProfiles IQ motif profile. 145 172 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00418 Car-Chr5 20405958 20408950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00418 3 395 IQD Protein Family AT5G13460 44.724 2.22e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00418 - - gmx:100777067 540.421