Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00403 ATGAACGGCGGGATCAACCTGAACGGGAAGGGATTCGTAACAAGATCGGCTTCGATCAACCTGAACGGGAAAGGATTCATTCCATCCAAGAGGCTTCGTAACAAGATCGCCGGATTCTCCACTCATCTCATGAAACGGATCCAGAAAGCATCTGTTCGTGGAATCTCATTGAAGCTTCAAGAGGAGGAGCGTGAGCATCGTATGGATTTCGTTCCCGAAGTCTCTGACCTTAGGACCGACCATCGACAAGGAAACCTTGGACATGCTTGCCGCTCTTGGAATGTCTGA 288 0.4965 MNGGINLNGKGFVTRSASINLNGKGFIPSKRLRNKIAGFSTHLMKRIQKASVRGISLKLQEEEREHRMDFVPEVSDLRTDHRQGNLGHACRSWNV 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00403 95 SUPERFAMILY Rps17e-like 26 48 IPR036401 GO:0003735|GO:0005840|GO:0006412
Car05g00403 95 Pfam Ribosomal S17 26 80 IPR001210 GO:0003735|GO:0005840|GO:0006412
Car05g00403 95 PANTHER 40S RIBOSOMAL PROTEIN S17 26 81 IPR001210 GO:0003735|GO:0005840|GO:0006412
Car05g00403 95 Gene3D - 11 48 IPR036401 GO:0003735|GO:0005840|GO:0006412
Car05g00403 95 ProSitePatterns Ribosomal protein S17e signature. 27 42 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00403 Car-Chr5 19616797 19617084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00403 21 81 Cytoplasmic Ribosomal Protein Gene Family AT2G05220 77.049 2.24e-28 98.2