Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00393 ATGTACTTCCTTGAAAGAGAGAATTCCTTAAACGAGTTAGGCTTTGGTGGCTATGGCAAGGTGTACAAAGGGGTTCTCCGTGATGGAAAAATAGTTGCAATCAAAAGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGAATGAAATAGAGTTGCTTTCAAGAGTTCATCACAAGAATCTTGTTGGCCTTGTGGGATTCTGCTTTGAACAAGGAGAACAGATGTTGGTTTACGAATTTATCACCAATGGTTCACTTAGAGAGACTTTGTCAGGCGCTCCAACTCAGATTTACCAAGGGTTGGCACTTCCTCTTTTGTATGGGACTTCACCCTGGGATTGGAGTTTGAGGCAATCTGATTGA 369 0.4282 MYFLERENSLNELGFGGYGKVYKGVLRDGKIVAIKRAQQGSMQGGLEFKNEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFITNGSLRETLSGAPTQIYQGLALPLLYGTSPWDWSLRQSD 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00393 122 Pfam Protein tyrosine and serine/threonine kinase 11 94 IPR001245 GO:0004672|GO:0006468
Car05g00393 122 Gene3D Phosphorylase Kinase; domain 1 13 84 - -
Car05g00393 122 SUPERFAMILY Protein kinase-like (PK-like) 8 119 IPR011009 -
Car05g00393 122 PANTHER OS05G0486100 PROTEIN 11 101 - -
Car05g00393 122 PANTHER RECEPTOR-LIKE PROTEIN 55 11 101 - -
Car05g00393 122 ProSitePatterns Protein kinases ATP-binding region signature. 13 35 IPR017441 GO:0005524
Car05g00393 122 ProSiteProfiles Protein kinase domain profile. 7 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00393 Car-Chr5 19361827 19363497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00393 11 94 Receptor kinase-like Gene Family AT1G79620 80.952 6.81e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Car05g00393 PK_Tyr_Ser-Thr 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00393 - - cam:101498992 163.31