Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00391 ATGGATTCAGGTTCACCATATCATTGGCTGAGGGAGTTAAGATGTGACTCCAACAGCTCAAATCCCATAAGCCTTCTTATTGAATGTGCCAAATGTGTTGCAACTGGAAGCATAAAAAATGCAGACATTGGTCTAGAGTACATTTCTCAGATTTCATCTCCTGATGGTAATGCTGTTCAAAGAATGGTAACTTATTTCAGTGAAGCACTTGGATACAGAATAGTAAAACATTTACCTGGTGTATATAAAGCTCTCAATTCCTCGAAAACATCGTTGTCTTCGGACGACATTCTTGTTCAGAAATACTTCTATGACCTCTGTCCATTTTTGAAATTTTCATACCTGATAACTAATCAAGCAATTATTGAATCAATGGAATTTGAAAAAGTGGTTCATATTATTGATCTTCATTGTTCCGAGCCGGCTCAATGGATAGATCTTTTACAAACTTTAAAGAAACGAAAGGGCGGTCCGCCTCATCTGAAAATTACAGGCATTCATGAAAAGAAAGAGGTGTTGGAACAAATGAGCTTACATTTGACAGCTGAAGCAGGAAAATTGGATTTTCCTTTACAGTTTAATCCAATAGTTAGCAAACTCGAAGATGTCGATTTCGATAACTTGCCTGTCAAGACAGGAGAAGCTGTTGCAATTACTTCTGTTCTTCAGCTGCATTCTCTACTTGCCACTGATGATGAAATGGCTGGGAGAATCTCACCAGCAGGACCAACATCTTTCAATCTGCAGAGAGCAGTACACATGAGTCAGAGGACTTTTGCAGAATGGCTTGAAAGAGATATGATCAATGCATATATTTTGAGTCCTGATTCGGCTTTATCGCCTCTTTTTTTAGGCGCTTCGCCTAAGATGGGGATCTTTCTTAACGCGATGAGGAAACTACAACCGAAACTTATAGTGGTAACTGAACAGGAATCAAATCTAAATGGATGTAATTTATTGGAGAGAATCGACCGAGCATTGTACTTTTACAGTGCGCTTTTCGACTGCTTGGAATCTACTGTTACGAGAACATCGATGGAGAGACAAAAACTTGAGAGCATACTTCTTGGGAAGCAGATAAAGAACATCATTGCTTGCGAGGGAGTCGATCGAAAGGAGAGGCATGAGAAGCTTGAGAAATGGAATCTAAGGCTTGAAATGGCTGGATGTGTCAAAGTACCTTTAAGTTACAATGGGAGGATTGAAGCAACAAATCTGTTGCAAAAATATAGTCATAAATACAAGTTTAGAGAAGTGAATGATTGTTTGCTTGTTTGTTGGAGTGATATACCACTTTTTTCTGTATCAGCTTGGAGTTTTAGGAGATGA 1329 0.3875 MDSGSPYHWLRELRCDSNSSNPISLLIECAKCVATGSIKNADIGLEYISQISSPDGNAVQRMVTYFSEALGYRIVKHLPGVYKALNSSKTSLSSDDILVQKYFYDLCPFLKFSYLITNQAIIESMEFEKVVHIIDLHCSEPAQWIDLLQTLKKRKGGPPHLKITGIHEKKEVLEQMSLHLTAEAGKLDFPLQFNPIVSKLEDVDFDNLPVKTGEAVAITSVLQLHSLLATDDEMAGRISPAGPTSFNLQRAVHMSQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLIVVTEQESNLNGCNLLERIDRALYFYSALFDCLESTVTRTSMERQKLESILLGKQIKNIIACEGVDRKERHEKLEKWNLRLEMAGCVKVPLSYNGRIEATNLLQKYSHKYKFREVNDCLLVCWSDIPLFSVSAWSFRR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00391 442 ProSiteProfiles GRAS family profile. 13 439 IPR005202 -
Car05g00391 442 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 440 IPR005202 -
Car05g00391 442 Pfam GRAS domain family 23 438 IPR005202 -
Car05g00391 442 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00391 Car-Chr5 19331379 19334553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00391 1 442 GRAS Transcription Factor Family AT1G50420 49.556 2.70e-151 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car05g00391 GRAS 1.5e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00391 - - gmx:100779726 765.763