Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00382 ATGAGTTGTTTTAGCTGTTGCGAAGAGGATGAGTACCATAAGACTGCTGAAAGTGGTGGACCATATGTTGTAAAAAATCCAGCAGTTAATTTGACTCTTATAAGGAATGATGGAAATTATCATGCTTCTGAGACTGCAAAACAGGGAGCTAAGGCTGTTAAAGAGCAGCCCATTGAAGTTCCTGAGATACAGGCAGATGAACTGAAAGAAGTTACTGATAACTTTGGACAAGATTCACTTATTGGAGAGGGATCCTATGAAAGAGTATACTATGGAGTTCTTAAAAATGGGCCGGCTGCAGCAATCAAGAAGTTAGATGCTAGTAAACAGCCCGACGTGGAATTCTTGGCCCAGATATATTTCTTTCAGGTTTCAATGGTATCAAGGCTGAAGCACGCAAATTTTGTCCAGTTGCTTGGATTTTGCGTTGATGGAAACTCCTGTATTCTTGCTTATGAATTTGCATCTAATGGGTCTCTTCATGACATTTTACATGATTTTGATTTGTCAAATCAGGCTCCAGACATGGCTGCACGTCTTCATTCCACCCATGTCCTTGGAACCTTTGGCTACCATGCACCAGACCAATATTATACAAGAGACCGAAGTTTAACTCTATATGTTCTGCCGAATGCACATTTAGATCCAGTGGCTCTGGATCAGCATAATAGCTTTGCACGTTCAATTCCTGATTCAATGCCAAATTACAATAGTCTCCCGGTGGAGGACAACTTAAGAGCACAAGCAACAAATAGGATTTTGGTGACTGCACCATTGAAGGACTGCAATTTAGAACATCGGGTCCTTTCTTAA 813 0.4096 MSCFSCCEEDEYHKTAESGGPYVVKNPAVNLTLIRNDGNYHASETAKQGAKAVKEQPIEVPEIQADELKEVTDNFGQDSLIGEGSYERVYYGVLKNGPAAAIKKLDASKQPDVEFLAQIYFFQVSMVSRLKHANFVQLLGFCVDGNSCILAYEFASNGSLHDILHDFDLSNQAPDMAARLHSTHVLGTFGYHAPDQYYTRDRSLTLYVLPNAHLDPVALDQHNSFARSIPDSMPNYNSLPVEDNLRAQATNRILVTAPLKDCNLEHRVLS 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00382 270 ProSiteProfiles Protein kinase domain profile. 75 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00382 270 SMART serkin_6 75 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00382 270 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 165 - -
Car05g00382 270 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 166 199 - -
Car05g00382 270 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 166 199 - -
Car05g00382 270 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 165 - -
Car05g00382 270 Gene3D Phosphorylase Kinase; domain 1 36 154 - -
Car05g00382 270 SUPERFAMILY Protein kinase-like (PK-like) 55 200 IPR011009 -
Car05g00382 270 Pfam Protein kinase domain 77 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00382 Car-Chr5 18648920 18655186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00382 35 166 Receptor kinase-like Gene Family AT4G39400 38.519 3.98e-20 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Car05g00382 Pkinase 7.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00382 K13436 - gmx:100808383 254.603