Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00378 ATGGGTTCTATCACCGAAGAAATTCAAGTTCTTCCAAAAAGTTCATCACTTCAAACAGAGGATGATGAATCATGTCTCTCTGCTATGTTTCTTTGTTGTGGTCCAATCATTTATACATCAGTATTAAAAGCTGCAATTGAACTCAATTTATTTGAGATCATATCTAAGGCAAATCCACAAGGTGTTTCAGCATCTTATGTTGCTTCACAATTACCAAAAATTATAACACAACATCCTCAATTGCCTCGAAGGCTTGATCGAATGTTGTGTCTTCTTGCAAGTCACTCTCTTCTTGTTTGTTCTATAAGTACAAATGAAGAAGGTGGAATTGAAAGACTTTATGAACTCTCTTTGGCTGGTAAATACTTTGTTAATGATGAGAATAATGGATCTGTGGCTTCATTTTCAACATTTATGAATCATCAAAAGCTCATGGATGCATTCAACAATTTTAAGGAGGTACTATTAGATTGTGATCATGGACTATACATGAAAGTTCATGGAATGCCTGTTTATCAAGGCATACAATCTGATCCAGCTTGGAATCATATGTTTAACAAAGCAATGAGAGATATTTGCACACTAGAAATGAAGAAGATATTAGAAAAATATAAAGGGTTTGAAGGAATATCAATGTTGGTTGATGTTGGAGGAGGAATTGGACAAAGTTTGAATATGATAATCTCTAAGTATCCTTCTATAAAGGGTATTAATTTTGATTTGCCTCAAGTAATACAAAATGCTCCAACTTATCCAGGGATTGAGCATATTGAAGGAGACATGTTTAAAAGTGTCCCAAAAGGTGATGCAATAATATTGAAGGCTGTATTGCATAATTGGTCTTATGACAATTGTTTGAAAATCCTAAGTATGTGCTACAAAGCATTGCCACAACATGGGAAAGTGATTGTTGTGGACTTCATAATGCCTCAAGAAATTCAGCATACAAAAGCAGATAAGATGATTACTAGCTTTGACAATCTCATGTTTTTGGATGGTGGTGTTGAAAGAACAAAGAAAGAATTTGAAAAGTTATGCAAATGTTCTGGTTTTTCCAGTTTTAATGTTGTTTGTCTTGCCTTCTCTGCTTTAGGAGTGATGGAGTTTTATAAATAA 1116 0.3387 MGSITEEIQVLPKSSSLQTEDDESCLSAMFLCCGPIIYTSVLKAAIELNLFEIISKANPQGVSASYVASQLPKIITQHPQLPRRLDRMLCLLASHSLLVCSISTNEEGGIERLYELSLAGKYFVNDENNGSVASFSTFMNHQKLMDAFNNFKEVLLDCDHGLYMKVHGMPVYQGIQSDPAWNHMFNKAMRDICTLEMKKILEKYKGFEGISMLVDVGGGIGQSLNMIISKYPSIKGINFDLPQVIQNAPTYPGIEHIEGDMFKSVPKGDAIILKAVLHNWSYDNCLKILSMCYKALPQHGKVIVVDFIMPQEIQHTKADKMITSFDNLMFLDGGVERTKKEFEKLCKCSGFSSFNVVCLAFSALGVMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00378 371 Pfam O-methyltransferase domain 159 352 IPR001077 GO:0008171
Car05g00378 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 371 IPR016461 GO:0008168
Car05g00378 371 PIRSF O-mtase 9 371 IPR016461 GO:0008168
Car05g00378 371 Pfam Dimerisation domain 41 93 IPR012967 GO:0046983
Car05g00378 371 Gene3D Vaccinia Virus protein VP39 182 359 IPR029063 -
Car05g00378 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 369 IPR029063 -
Car05g00378 371 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 371 - -
Car05g00378 371 SUPERFAMILY "Winged helix" DNA-binding domain 20 127 IPR036390 -
Car05g00378 371 PANTHER O-METHYLTRANSFERASE 1 371 IPR016461 GO:0008168
Car05g00378 371 Gene3D - 37 200 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00378 Car-Chr5 18437786 18440933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00378 1 361 Monolignol Biosynthesis Gene Families AT5G54160 45.604 8.22e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00378 - - cam:101492092 751.51