Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00365 ATGGAGAACCATAACAAGGTTCTAATGCTATTTGCATATACTTTCTTTTTTTTCTCTATACAAACTTTTTCTAAACAAAACACTCTTACAACTATAACACCAAATCAATTTATTCAATATAATGACACCCTTGTTTCTTCAACTGGAATCTTTGAAGCAGGTTTTTTCAACTTTGGAGATCCACAACGTCAATACTTTGGTATATGGTACAAAACCATATCACCAAGGATTATTGTATGGGTTGCTAATACAGATAATCCAATACAAAACTCATCTGTAATACTCAAACTCACCGAAGAAGGAAGCCTTCTTATTCTTGATGGATCAAGAGGTAAAATTTGGTCCTCCAATTCATCAAGGATCACAGTTGTGCAGTTGTTAGATTCAGGAAACCTTGTTGCGAATGATGCGAACAACACCACATTATGGGAAAGCTTTGATTATCCTGGTAATACTTTCCTTCCTGGAATGAAGCTGAGAACTAATTTACTTACAGGTCCTTATAAATATATCAAATCTTGGAAAAGTCCTGACGATCCTTCCGACGGTGAGTTTTCGTATCGGATGGATACTCGTGGTTATCCTCAATTGATTGTTGCTAAAGGAGCAAAAATTCTTCATAGAGGAGGGTCATGGAATGGATATATTTTTACTGGAATTTCATGGCAAATGCATAGATACTTTAATTTTTCATTCGTGTTAACTAACAAAGAAGTCTCATCCGATTACGAAACGTTGAATAGTTCGATGATTACTAGATTTATTCTAGATCAATCAGGAAATTCGCAACGTTTCGTTTGGTCGGATAGGACTCAAGATTGGGAGGCTATAATTTCACGCCCATTAGATGACTGTGAAAATTACGCAATGTGTGGTGTAAACTCAAACTGCAATATTAATGACTCTCCAATTTGTAAATGTTTGGATGGTTTTATACCAAAATTTCAATCAAAATGGGATTCATCAGATTGGACTGGTGGATGTATAAGGAGAACTAAATTGAATTGTGTTAATGGAGATGAGTTTTTGGCATACACAAATGTGAAGTTGCCTGACACATCATCATCTTGGTTTGATAAGAGGTTGAGCCTTGATGAATGTAAGAATGTGTGTTTGAAAAACTGTACTTGCATTGGATATGCAAATTTAGATGTTAGAGATGGTGGGAGTGGTTGCTTGCTTTGGTTTGATAGCATTGTTGACATGAGAGAACATGTGGACCAAGGACAAGACATTTACCTACGACTTGCATCTTCAGAACTAGATCATATAAAGAATAAGAAGAACTTGAATATGAAGAAGCTTGCTGGGATTCTTGGAGTAATTATTGCATTCATCATAGCACTTACAGTTCTTTTGTTGGTCTCATCAACATTTAGGAAGAAGCTTGGGTATATAAAAAAGTTAATTAAATGGAACCACAAGAAAGAAAACAAGGAAAATAAAGAAGATGAGTTGGCAACAGTATTTGATTTTTCAACCATTGATAATGCCACAAATAACTTCTCTAACAGAAACAAGTTAGGAGAAGGTGGCTTTGGACCAGTATACAAGGGTATATTAGCAGATGGACAAGAGATTGCCGTTAAGAGACTTTCTAAAACATCAGGACAAGGAACTGAGGAGTTCAAAAATGAAGTTAAATTAATGGCAACACTTCAACATCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCATCATCATGAGAAGTTGTTGATCTATGAGTTCATGCCTAACAGAAGCTTGGATTACTTTATTTTTGGTTTGACCTTCCACTCCAACCAAATTAATTTATTTATCTTGATTCTACTTTTGTTTTAG 1824 0.3503 MENHNKVLMLFAYTFFFFSIQTFSKQNTLTTITPNQFIQYNDTLVSSTGIFEAGFFNFGDPQRQYFGIWYKTISPRIIVWVANTDNPIQNSSVILKLTEEGSLLILDGSRGKIWSSNSSRITVVQLLDSGNLVANDANNTTLWESFDYPGNTFLPGMKLRTNLLTGPYKYIKSWKSPDDPSDGEFSYRMDTRGYPQLIVAKGAKILHRGGSWNGYIFTGISWQMHRYFNFSFVLTNKEVSSDYETLNSSMITRFILDQSGNSQRFVWSDRTQDWEAIISRPLDDCENYAMCGVNSNCNINDSPICKCLDGFIPKFQSKWDSSDWTGGCIRRTKLNCVNGDEFLAYTNVKLPDTSSSWFDKRLSLDECKNVCLKNCTCIGYANLDVRDGGSGCLLWFDSIVDMREHVDQGQDIYLRLASSELDHIKNKKNLNMKKLAGILGVIIAFIIALTVLLLVSSTFRKKLGYIKKLIKWNHKKENKENKEDELATVFDFSTIDNATNNFSNRNKLGEGGFGPVYKGILADGQEIAVKRLSKTSGQGTEEFKNEVKLMATLQHRNLVKLLGCSIHHHEKLLIYEFMPNRSLDYFIFGLTFHSNQINLFILILLLF 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00365 607 SMART ntp_6 337 416 IPR003609 -
Car05g00365 607 CDD PAN_AP_plant 332 417 - -
Car05g00365 607 ProSiteProfiles Protein kinase domain profile. 502 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00365 607 Pfam PAN-like domain 336 402 IPR003609 -
Car05g00365 607 Pfam Protein tyrosine and serine/threonine kinase 505 587 IPR001245 GO:0004672|GO:0006468
Car05g00365 607 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 590 - -
Car05g00365 607 CDD EGF_CA 283 314 - -
Car05g00365 607 Gene3D Hepatocyte Growth Factor 333 418 - -
Car05g00365 607 SUPERFAMILY Protein kinase-like (PK-like) 486 593 IPR011009 -
Car05g00365 607 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Car05g00365 607 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Car05g00365 607 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 180 IPR036426 -
Car05g00365 607 SMART blect_4 35 149 IPR001480 -
Car05g00365 607 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Car05g00365 607 Pfam D-mannose binding lectin 78 175 IPR001480 -
Car05g00365 607 Pfam S-locus glycoprotein domain 208 314 IPR000858 GO:0048544
Car05g00365 607 CDD B_lectin 41 149 IPR001480 -
Car05g00365 607 Gene3D - 24 146 IPR036426 -
Car05g00365 607 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 20 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00365 Car-Chr5 17972658 17979218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00365 440 588 Receptor kinase-like Gene Family AT4G23190 48.684 7.05e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car05g00365 S_locus_glycop 1.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00365 - - gmx:100819820 823.928