Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00341 ATGGCGACTATTGTGACAAAACAAACACTTGTTCTCGTCATCAAATTAGTAGAAAAGATTGATTCTCGTGAATTCTCTGTCGTCTTCAAGAACACGAAGTTTCACTTTTCGCTCTTGCTAAATCTGAAAGAAACACTGTCGAGGCTTCTAACTGTAATTAACGATGCGGAGGAAAAACTATTTACCGATCCTCATATGAAAGAATTGCTGGTTATGTTGAGATATGATGTTTATAAAGCTGGCAAATTACTTGGCAATGTGCGTTACAATGTGTATGAAACCCTAACTTCTAAGGTGCGGAAAAAATTATTTATTCTTTTTCATCGGATTTATTCTAACAAGCAAAAATTAATTGAAAGATTAAGTCTTTCTAATTATGTTCCCTTTCGAAATCTTACAAGCTCTGTAGTGGCTGATGAATCTTGTATTTATGGAAGAGACGATGATCAAAAGTTACTTAAAGGTCTTTTGCTGTCTAGTGATTCTGATAGTAAAATCAGAGTTATTTCCATTGTTGGTATGGTAGGGATTGGTAAAACAACCCTTGCTAAACTCCTTTACAATGATCCCCAAGTAAAGGACAATTTTGACTTAAAAGTGTGGGCTTATATCTCAAAACATTTTGATGTTTTGACGGTTATTAAAACCATTCTTGAATCTATTGCTTCCCAAACAATCAGTAGTGATAACATGGATTCTCAACCTCTTGAATCTTTCATTGCAAAAAGAAATGACACTAATGATGTGAAAACCATTGACCAGAATCTTTTATTAGTGACATTGCTGCAAATTTTAAGCACTAAAAAGTTTCTGTTAGTATTGGATGACGTTTTGGATGCAAAATCTGTCGATTGGATATATATGATGGACATCTTTAATGTCGGGAAAATGGGAAGTAGGATCATCATCACAACACGGAATGAAAAAGTTGCACTATCCATGCAAACTTTTCTTTTTGTCCACTATATGAGACCTATTGGAAGTGAAGATTGCGGGTTTATAATTGCCGCACATTCTTATGTAGCATGTAACTATAACAACATTGATTTTGAAACTATTTTTGCGGAAAAATGTGATGGATCACCATTAGCTGCAATTACACTCGGAAGGGCTTTTCATCGCATCACACTTTCTCAACATTATGAGCAGAGTTTTGAGCTAGAATGTAACATTTTGAGATTGGCAAATTATGAGGTGCGCAATGCTCTAGAATCGAGCTACCTTCATCTTTCGGATCCTTTACAACGATGCTTTGCATATTGTTCAATTTTTCCGAAGAAGTCCATCTTAAATAAAAAGATGGTAGTTCAATTGTGGATTGCAGAAGGCTTAGTAGAATTGCCCACAAGTCAACAAAGTTTGGAAAAAGTTGGAGAAGAATACTTTGATGTACTAGTGTCATGGTCGTTGATACAACGACGATCTATCAATGATGAGGAAGCAAACTTTGAAATGCATAACCTCATCCATGATTTAGCTACAGTGCTTTCATCAGTTCTACTTGAAAGAGTACATAGTTTGTCATACAATAGAGGGCTATATGACTCATTTAATAAATTTGATAAAGTGGATGGATTAAAATATCAAAGAACCTTTCTAGCTTTACCATTACAAGAACAGTTACCTCTTTGTTTACTATCGAACAAGGTAGTACATGACTTGCTGCCAACAATGGAACAGTTACGTGTCTTATCTTTGTCAAACTACAAGAGTATAATTGAGGTTCCCAACTCTATCGGAAATTTATTATACCTGAGGTACTTAAATCTTTCTCGCACTAAGATTGAAAGGTTGCCTTCTGAAACATGCAAACTTCACAATCTGCAATTCTTGTTGTTGTCAGGCTGTAAAAGGCTCACTGAATTGCCAGAGGACATCGGAAAATTGGTTAATCTACGCCACCTTGACGTTAGTGACACTGCATTGAGGGAGATGCCTGTACAAATAGTCAAACTAGAAAGTCTCCAAATTTTATCCGACTTTGTTGTTAGCAAACGTAATGGTGGATTGAAGGTTGCAGAACTAGGAAAATTTCCCCACCTACATGGAAAACTTTCCATCTCCCAACTACAAAATGTTAACGATCCCTTTGAAGCTTTTCAAGCTGGTATGAAGATGAAAGAACAAATAGACGGGTTAGCTTTAGAATGGGATTCTGGGAGCAGTTTTTCAAATTCACAAATTCAAAGTGTTGTATTTGAACATTTGCAACCCTCAACAAATTTGAAAAGTCTCACCATCAAAGGCTATGGTGGAATCAACTTTCCAAATTGGTTGGGTAATTTTTTATTTGGCAACATGATGTATTTAAGGATCTCAAATTGTGATAATTGTATATGGCTTCCACCCCTTGGACAATTAGGTAATTTGAAAGAACTCATTATTGATTCGATGCTCTCAATAAAGAGTGTTGGTACTGAGTTTTATGGAAGTGATAGTTCTCCTTCATTTCAACCATTTCCCTCGTTAGAGACTCTACACTTTGAGGATATGCCTAATTTGGAGAAGTGGAACATAATCGGAGGTACAGCTATAAAGTTTCCTAGTCTTAAAAGTCTGTTACTAATTAAGTGTCCAAAATTGATAGGAAACATACCCGACAAACTTCCTTCCTTAATTGAATATGACTTAAGGGAACATGATCTGCAAGTGGAGTCAAGACATTCATATGATAATGGCAAGAATATAACTATAATTCCATTATCAGATGTATTGAGCCAATTGATGTTCCCTCCAAATTCTCTTCAAAAGTTGACCATAGACGGCTTTCCATCTCTGACGTCTTTTCCAAGAGATGGTCTACCAAAAACTTTGAAATTTCTTATAATCAGTAATTGTGAGAATCTAGAGTTCCTTCCTAATGAATACTTGCACAATTACTCATCTCTCGAAGAATTGAAAATATCTTATAGCTGTAATTCCATGATATCATTTACGTTGGGTGCTCTCCCTATCCTCAAGAGTCTGTTTATCGAGGGTTGTAAAAATCTAAAATCGATATTAATTACAGAAGATGCGTCGCAAAAAAGTCTCTCGTTTCTTAGAAGCATCAGAATATGGGATTGTAATGAGTTTGAGTCATTTCCCCCAGGTGGATTAGCCACTCCAAACCTTGTTTATATTGCAATGTGGAAATGTGAGAAGCTTTGTTCACTGCCACAAGCAATGAACACTCTAACTGACCTTCAAGAAATGGAAATTGATAATCTACCAAATCTTCAATCTTTTGTCGTAGATGATTTACCTATCAGTTTACAGGTATTGACTATTGGCTCTGTTGGAGGGATTATGTGGAATACTGGCCCAACTTGGGAACATCTCAATCGCCTGTCGATGTTGCGAATTAAAGGTAGTAGTGATACGGTGAACTTGTTGATGGTGCCATTGCTACCGGCATCTCTCGTGACACTATGCATTTGTGGTCTTAATGATACAAGAATTGATAGGAAGTGTACTAAGTATGACTCGCTGTCCATTACTGAAAGCAAGGTTGCGGAGGAAGCAAGGGCAAGAGTGGCGTAA 3522 0.3646 MATIVTKQTLVLVIKLVEKIDSREFSVVFKNTKFHFSLLLNLKETLSRLLTVINDAEEKLFTDPHMKELLVMLRYDVYKAGKLLGNVRYNVYETLTSKVRKKLFILFHRIYSNKQKLIERLSLSNYVPFRNLTSSVVADESCIYGRDDDQKLLKGLLLSSDSDSKIRVISIVGMVGIGKTTLAKLLYNDPQVKDNFDLKVWAYISKHFDVLTVIKTILESIASQTISSDNMDSQPLESFIAKRNDTNDVKTIDQNLLLVTLLQILSTKKFLLVLDDVLDAKSVDWIYMMDIFNVGKMGSRIIITTRNEKVALSMQTFLFVHYMRPIGSEDCGFIIAAHSYVACNYNNIDFETIFAEKCDGSPLAAITLGRAFHRITLSQHYEQSFELECNILRLANYEVRNALESSYLHLSDPLQRCFAYCSIFPKKSILNKKMVVQLWIAEGLVELPTSQQSLEKVGEEYFDVLVSWSLIQRRSINDEEANFEMHNLIHDLATVLSSVLLERVHSLSYNRGLYDSFNKFDKVDGLKYQRTFLALPLQEQLPLCLLSNKVVHDLLPTMEQLRVLSLSNYKSIIEVPNSIGNLLYLRYLNLSRTKIERLPSETCKLHNLQFLLLSGCKRLTELPEDIGKLVNLRHLDVSDTALREMPVQIVKLESLQILSDFVVSKRNGGLKVAELGKFPHLHGKLSISQLQNVNDPFEAFQAGMKMKEQIDGLALEWDSGSSFSNSQIQSVVFEHLQPSTNLKSLTIKGYGGINFPNWLGNFLFGNMMYLRISNCDNCIWLPPLGQLGNLKELIIDSMLSIKSVGTEFYGSDSSPSFQPFPSLETLHFEDMPNLEKWNIIGGTAIKFPSLKSLLLIKCPKLIGNIPDKLPSLIEYDLREHDLQVESRHSYDNGKNITIIPLSDVLSQLMFPPNSLQKLTIDGFPSLTSFPRDGLPKTLKFLIISNCENLEFLPNEYLHNYSSLEELKISYSCNSMISFTLGALPILKSLFIEGCKNLKSILITEDASQKSLSFLRSIRIWDCNEFESFPPGGLATPNLVYIAMWKCEKLCSLPQAMNTLTDLQEMEIDNLPNLQSFVVDDLPISLQVLTIGSVGGIMWNTGPTWEHLNRLSMLRIKGSSDTVNLLMVPLLPASLVTLCICGLNDTRIDRKCTKYDSLSITESKVAEEARARVA 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00341 1173 Gene3D Ribonuclease Inhibitor 895 1090 IPR032675 -
Car05g00341 1173 Coils Coil 39 59 - -
Car05g00341 1173 Gene3D - 126 318 IPR027417 -
Car05g00341 1173 SUPERFAMILY L domain-like 500 884 - -
Car05g00341 1173 Pfam NB-ARC domain 158 385 IPR002182 GO:0043531
Car05g00341 1173 Gene3D Ribonuclease Inhibitor 534 894 IPR032675 -
Car05g00341 1173 SUPERFAMILY RNI-like 816 1086 - -
Car05g00341 1173 PRINTS Disease resistance protein signature 358 372 - -
Car05g00341 1173 PRINTS Disease resistance protein signature 168 183 - -
Car05g00341 1173 PRINTS Disease resistance protein signature 603 619 - -
Car05g00341 1173 PANTHER DISEASE RESISTANCE PROTEIN RP 22 952 IPR044974 GO:0006952
Car05g00341 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 421 IPR027417 -
Car05g00341 1173 PANTHER OS05G0414200 PROTEIN 22 952 - -
Car05g00341 1173 Gene3D - 401 495 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00341 Car-Chr5 16949638 16953390 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00341 572 667 WRKY Transcription Factor Family AT4G12020 40.206 4.74e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00341 - - mtr:MTR_0603s0010 1209.51