Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00326 ATGAAAAAAATTATTCAAGGAGTACCTAGAGCTTTGGTTGCTGGTTTTGTTAAGACTGATAAGGAATTTCAGAGCAGACGTGTGGACTTTGGAGAAACTTCTGGAACCATAGCCACATTTGTGATAGTTGATCGGTGGACTGTGACTGTCGCATCTGTTGGAGATTCTCGTTGTATACTAGATACTCAAGGTGGTGTTGTTACCACCTTAACAGTTGATCACAGACTGGAAGAGAATATTGAAGAGAGGGAACATGTTACAGCTAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCCGAGCTATCAAAAACTGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTCTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCCAACTTGCTGATATGCAGGTTGTCAAGGAAGCACTAAAAACAAGAGGTTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAATGAATTGTCGTCAACACCTCCCCCGAGAAAGAGGAACAAGTTGATAGATTTTTTCTTTAGAAAGAAGTCTTGTGATTCTGCTGGTAAGCTATCAAAGAAGCTTTCAGTTATAAATATAATGGAAGAACTGTTTGAAGAAGGATCAACAATGCTTGCTGAAAGGTAA 672 0.4092 MKKIIQGVPRALVAGFVKTDKEFQSRRVDFGETSGTIATFVIVDRWTVTVASVGDSRCILDTQGGVVTTLTVDHRLEENIEEREHVTASGGEVGRLSIVGGAELSKTGGRLIIASDGIWDALSSEMAAKSCRGLPAQLADMQVVKEALKTRGLKDDTTCIVVDIIPPDNELSSTPPPRKRNKLIDFFFRKKSCDSAGKLSKKLSVINIMEELFEEGSTMLAER 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00326 223 Gene3D - 2 105 IPR036457 -
Car05g00326 223 Gene3D - 106 166 IPR036457 -
Car05g00326 223 CDD PP2Cc 8 164 IPR001932 -
Car05g00326 223 PANTHER ALPHABET, ISOFORM E-RELATED 104 222 - -
Car05g00326 223 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 6 102 - -
Car05g00326 223 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 104 222 - -
Car05g00326 223 SMART PP2C_4 2 162 IPR001932 -
Car05g00326 223 ProSiteProfiles PPM-type phosphatase domain profile. 1 164 IPR001932 -
Car05g00326 223 Pfam Protein phosphatase 2C 10 97 IPR001932 -
Car05g00326 223 SUPERFAMILY PP2C-like 8 164 IPR036457 -
Car05g00326 223 PANTHER ALPHABET, ISOFORM E-RELATED 6 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00326 Car-Chr5 16272379 16273621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00326 5 223 PP2C-type Phosphatase Gene Family AT1G68410 64.591 4.34e-101 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00326 - - gmx:100779571 344.354