Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00308 AAATCTTCGTGTTACCTGCGGATTTTCCTGAGAAAATAATTCCGCAGCAAACGTCTCTTAAAAAACCCGTGCCGCAGCAAATTCCGCAGCAAAGTTACTTTTGTCGAAACCTTTGCAAATTCCGCAGTCACCATCGTCACACCTCGCCGCCACATCTTAACCATAACCACTACAGTCACACCTCTCCATCATCGCCACCATCGAATCTTAACCTCCTTACATTGCATCTCAACTTCGCTGTTATCATACTGTGTTTTTCTGAGATTGGAGTCTATTTTCAAGTTAAAGGAGGCAAAGAGTTCCGACATTGTCGCCATTGCTCCTTGTATAGAGGAGAAACTTCTGGAACCACAGCCACATTTGTGATAGTTGATTGGTGGAATGTGACTGTCGCATCTGTTGGAGATTCTCGTTGTATACTAGATACTCAAGGTGGTGCTGTTACCACCTTAACAGTTGATCACAGACTGGAAGAGAATATTGAAGAGTATGTTAATATGATTTTATCTCTAAGGTTGATGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCCGAGATTGGTCCCCTTCGATGCTGGTCGGGAGCTATCAAAAACTGGTGGGAGGCTTATAATTGCTTCTGATGGCATATGGGATGCTCTATCATCAGAAATGGCTGCAAAATCTTGCCGTGGTTTGCCTGCCCAACTTGCTGCTATGCAGGTTGTCAAGGAAGCACTAAAAACAAGAGGTTTAAAGGATGATACAACATGCATAGTAGTTGACATAATCCCACCTGATAACGAATTGTCGTCAACACCTCCCCCGAGAAAGCGGAACAAGTTGATAGATTTTTTCTTCAGAAAGAAGTCTTGTGATTCTGCTGGTAAGCTATCAAAGAAGCTTTCAGCTATAAATATAATGGAAGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGGTTGTTCTAA 959 0.4286 IFVLPADFPEKIIPQQTSLKKPVPQQIPQQSYFCRNLCKFRSHHRHTSPPHLNHNHYSHTSPSSPPSNLNLLTLHLNFAVIILCFSEIGVYFQVKGGKEFRHCRHCSLYRGETSGTTATFVIVDWWNVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEEYVNMILSLRLMEVKLGGLALLVVPRLVPFDAGRELSKTGGRLIIASDGIWDALSSEMAAKSCRGLPAQLAAMQVVKEALKTRGLKDDTTCIVVDIIPPDNELSSTPPPRKRNKLIDFFFRKKSCDSAGKLSKKLSAINIMEELFEEGSAMLAERLF 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00308 318 CDD PP2Cc 113 257 IPR001932 -
Car05g00308 318 Gene3D - 187 261 IPR036457 -
Car05g00308 318 PANTHER ALPHABET, ISOFORM E-RELATED 189 317 - -
Car05g00308 318 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 94 162 - -
Car05g00308 318 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 189 317 - -
Car05g00308 318 Pfam Protein phosphatase 2C 112 159 IPR001932 -
Car05g00308 318 ProSiteProfiles PPM-type phosphatase domain profile. 1 257 IPR001932 -
Car05g00308 318 PANTHER ALPHABET, ISOFORM E-RELATED 94 162 - -
Car05g00308 318 Gene3D - 93 170 IPR036457 -
Car05g00308 318 SUPERFAMILY PP2C-like 109 257 IPR036457 -
Car05g00308 318 SMART PP2C_4 3 255 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00308 Car-Chr5 15297784 15300777 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00308 94 317 PP2C-type Phosphatase Gene Family AT1G68410 58.566 1.77e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00308 - - gmx:100779571 291.967