Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00292 ATGTTCTTAAAGTTTGTAATCTTTTTGGTTGCTATTGTGTGTGCTTATATTGACAATGTACAAGCAAGTTTACCACCTTGTTCTGGAAGACCAACAATAGAATGTGTGCCAATGATATGTACTAATCCCCTTGTTGCAAACCCTATAGTCCACCACCAAGTGAAAGGAAACACTATAAGTTTGAACCTAAGTTTTATTGTTATTCCAATCAATGTGTTTGAGAAAAACACATCTCCTATATACTTCAAAAATGATAGAGATAGAAGGGATTTAATCACGTGTGGAGCAGTTGCAAGTGTTGCTGCTACCTTTCGTGCCCCAGTTGGTGGTGTCCTTTTCGCACCGGAAGAAGCAACTTCATGGTGGACGAGTGCTCTTCTATGGCGCACATTCTTTACAAATGTCGTTGTGGCTGCGGTGTTGAGGACTCTTATACAATTTTGTCAAGAAGAGGGAGGTCAATGTGGTCTTTTCGGCAAAGGAGGACTCATTATGTTTGATGTTAATTCTGCAAAGCCTGCCTACACCACACCAGACCTCTTACCAGATTAG 552 0.4076 MFLKFVIFLVAIVCAYIDNVQASLPPCSGRPTIECVPMICTNPLVANPIVHHQVKGNTISLNLSFIVIPINVFEKNTSPIYFKNDRDRRDLITCGAVASVAATFRAPVGGVLFAPEEATSWWTSALLWRTFFTNVVVAAVLRTLIQFCQEEGGQCGLFGKGGLIMFDVNSAKPAYTTPDLLPD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00292 183 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 81 181 - -
Car05g00292 183 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 81 181 - -
Car05g00292 183 Gene3D Clc chloride channel 36 182 - -
Car05g00292 183 Pfam Voltage gated chloride channel 78 145 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Car05g00292 183 SUPERFAMILY Clc chloride channel 82 149 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00292 Car-Chr5 14347869 14349017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00292 81 181 Ion Channels AT5G49890 77.228 7.33e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00292 K05016 - cam:105853102 358.607