Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00291 ATGACGAAGGACAAGTCCAATCTCGACGGCGCCGCCAGCTATTCGTCCAGACCTCTGTCCTCTTTCGTTAAAAAAGTCGATCTTCAAATTTTCACTCACGAGCTCCAGCAAAGAGAGACCGCAATAGTATCACGGAAGAAACTTGTTAAAGACACCAAGGTCAACAATGGATCCTTTTCTGCTACTGAGCAACTTCTAAAACTGAACCCTGTGCTCGAATCGCTCCTGGTTGGCGAGGAACTTGTGGACCAGAAGAGATATCTCGAATACTCTTGCAAACCAAAGTTATTGGAAGCTGAAAGCATACCAACAAAATTAGCTGACATAGCTCTTCTTTCTGGATGTTCTGCAGGCGGCCTAACGACTATTATACACTGCGTTGAATTTCGAGGTCTCTTTCCAAGGACTACTAAAGTGAAATGTCTAAGTGATGCAGGCTTGTTTCTTGATTTAATTGATATATCTGACGAGCGTACCCTCAGGAATATGTACAATGGTGTTGTAGGTTTTCAGGGCTAA 519 0.4355 MTKDKSNLDGAASYSSRPLSSFVKKVDLQIFTHELQQRETAIVSRKKLVKDTKVNNGSFSATEQLLKLNPVLESLLVGEELVDQKRYLEYSCKPKLLEAESIPTKLADIALLSGCSAGGLTTIIHCVEFRGLFPRTTKVKCLSDAGLFLDLIDISDERTLRNMYNGVVGFQG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00291 172 PANTHER NOTUM-RELATED 104 172 IPR004963 GO:0016787
Car05g00291 172 PANTHER PECTIN ACETYLESTERASE 104 172 - -
Car05g00291 172 Pfam Pectinacetylesterase 107 171 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00291 Car-Chr5 14344680 14347843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00291 105 171 Carbohydrate Esterase AT3G05910 68.657 1.03e-25 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00291 K19882 - gmx:100788448 113.62