Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00278 ATGAATGAAAAAATAGAAACCAAAGATCACAACCCTCAAATTCTCAACCCTAAAGAAGAATCACCAAGAAAACACATTATTATAGGTAGTGGAGGGGAGAGACTTAAAAGAGATGAATGGAGTGAAGGAGCTGTTTCAACACTTCTTGAAGCCTATGAATCAAAATGGATACTTAGAAACAGAGCAAAACTCAAAGGACAAGATTGGGAAGATGTTGCAAAATATGTTTCATCAAGATCAAACTCAACAAAATCACCAAAAACACAAACACAATGTAAAAACAAGATTGAGTCTATGAAGAAAAGGTATAGATCAGAATCAGCTACTTCAGAATCTTCAGCTTGGCCTTTATATTCTAGACTTGATCTTCTACTACGTGGGACAGGACAATTATGTTCTACAATTCCAACACAACATGTTACAACAACACCTTCTCAATTGCAACATGAAGATGAGTTAGAAACTAAATCATCTGACCATGTAGCTAACAAGAATCCACAGGACACAGATAGTAGCACGCCTGCTCTTTACAGCGAaaaagacgagcgaaaatgcaacaaaaggagaaagaaaacagagaacaacaacaacagacaaaagaaagaagcaaTGGGAATAGCAGAGAGCATAAGGTGGCTAGCAGAGGTTGTTGTAAGGTCAGAACAAACAAGAATGGACACATTGAAAGAGATAGAAAAGATGAGAGTCGAAGCCGAAGCGAAGCGAGGCgaaatggaaattaaaagaactgaaataattgcaaatACACAACTAGAGATTGCTAGGATCTTTGCAAATGTTAATAACAAAGGTGTTGATTCATCATTGAGAATTGGAAGAAGTTAA 846 0.3262 MNEKIETKDHNPQILNPKEESPRKHIIIGSGGERLKRDEWSEGAVSTLLEAYESKWILRNRAKLKGQDWEDVAKYVSSRSNSTKSPKTQTQCKNKIESMKKRYRSESATSESSAWPLYSRLDLLLRGTGQLCSTIPTQHVTTTPSQLQHEDELETKSSDHVANKNPQDTDSSTPALYSEKDERKCNKRRKKTENNNNRQKKEAMGIAESIRWLAEVVVRSEQTRMDTLKEIEKMRVEAEAKRGEMEIKRTEIIANTQLEIARIFANVNNKGVDSSLRIGRS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00278 281 MobiDBLite consensus disorder prediction 175 189 - -
Car05g00278 281 MobiDBLite consensus disorder prediction 1 30 - -
Car05g00278 281 Coils Coil 228 248 - -
Car05g00278 281 MobiDBLite consensus disorder prediction 149 163 - -
Car05g00278 281 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 16 277 - -
Car05g00278 281 Coils Coil 182 202 - -
Car05g00278 281 Pfam Myb/SANT-like DNA-binding domain 37 123 IPR044822 -
Car05g00278 281 Gene3D - 40 105 - -
Car05g00278 281 MobiDBLite consensus disorder prediction 139 202 - -
Car05g00278 281 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 16 277 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00278 Car-Chr5 6920015 6922353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00278 29 137 Trihelix Transcription Factor Family AT3G14180 37.168 4.45e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car05g00278 Myb_DNA-bind_4 5.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00278 - - gmx:100784245 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00278 05 6920015 6922353 Car05g00278 05 6920015 6922353 ECH