Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00271 ATGGCTTTCAAAACTAACCTAAACGAAAACGAAAAAGAACAAGTTCCGTACACagtagaacaaccagaagtagaagacgatgacgatgacgacgaaatggaagaagaaaagtgggacgaatgggaaggagacgaaggagGTTCAGACTCTCAATTCGTCTGTCTCTTCTGTGATTCTAATTACAGTTCGTCCAGTTCTTTGTTCCAACATTGCGCTTCCGATCACCACTTTGATTTTCATTCCGTTAGAAATTCTCTTAATTTGGATTTCTATGCTTCCTTTAAGCTCATTAATTACATTCGCTCTCAGGTGGCAGAGAGCAGATGTTGGAGTTGTGGGTTATCTTGTCAGTCCAAACATGATTTGCAGAATCACTTGCATGATGTAATTGACTTCAATGGTATTAAGCCTTTGTGGGATGATGATAGATATCTAAAACCTTTCATGCAAGATGATTCATTGCTGTGCAACTTTGGTGAATACGAAGAAGTTGAAGATGAACAAATTTCTATCACGGATGAAGATCTCCTGAGGGAATTGAAGAATATTAAAGAAGCTTATGGTGATGATCTAGATGCCGTGAAAAGTTTAGTAGCTAATGGTTTTTTTAGAAGAAACGAGGCCACTTCTGTTTCGGATGATCATTCAAACCATGCTAGTTCTTCAGATAAGGAACTTATTAATGGGAAGGGCTCAAGATCATGTGTTTCATTAATAGGTAAAGAACCAGAAGAAGGGTCTTTGATGGGTAATCCTCAAAATCACATTGCAAAGCATATTAAGAAGGTTAATGAAAGTTATTTTGGGTCTTACAGTTCATTTGGCATCCATCGGGAGATGTTAAGCGATAAGGCTAGAATGGTTGCCTATGGCCAAGCAATTTTGAAGAATCCCTCTCTGCTAAATGGTGCCGTGGTTATGGATGTAGGTTGTGGAACTGGCATCCTCAGCCTTTTTGCAGCTCAAGCAGGGGCTTCGAGGGTCATTGCAGTTGAGGCTAGTGCCAAGATGGCAGAAGTGGCATCTCGGGTTGCAAAAGATAACGGTCTCTTGCTGAGTAAAAGCCAACCTGAAGTCAACGGCAACCACAAAGGAGTTGTAGAAGTGGTTCATGGCATGGTTGAAGAAATTGACAAAATTGTTGAAATTCAACCTCAAAGTGTTGATGTATTGTTAAGTGAATGGATGGGATATTGCTTGTTGTATGAGTCCATGCTTGGTTCAGTGCTTTATGCGCGTGATCGGTGGCTGAAGCCTGGGGGTGCCATTCTTCCTGACACAGCAACAATGTTTGTTGCTGGATTTGGAAAAGGCGGTACCAGTCTTCCATTTTGGGAGAACGTCTGTGATTTTGACATGTCTTGCATTGGGAAGGAGCTTGTGACAGATGCTGCCCAATATCCTATAGTTGATGTCATAGACCATCAAGATTTAGTTACCAGTTCGACTATTCTTCAGAACTTTGACTTGGCTACCATGAAGCACAATGATGTTGATTTCACTGCAACAGCTTCTTTGGAACCAAAACTGAGTGTTTCAGAAAACGGAAAAACAAATTTGAATTCTAAAACATGTTGCTGGTGTTATGGAGTTGTCCTATGGTTTGAAACTGGATTTACAAGTAGGTTCTGCCGGGAAACACCAGCTGTGCTGTCAACATCCCCTTACACTCCAAAAACACATTGGTCGCAAACGATCTTAACTTTCCATGAACCCGTTGCCATTGGATTGGGCGAAGAAAATGAGGGAAACCCGGAAACGATTGGCACTGAAGTCTACCCTGCTGTGAAGATTGATTTGCGTGTCAGCATCGTCCGTTCTACTGAGCATCGCAGCATTGACATTTCCATGGAAGCTGCTGGTGTTGGTCCGGATGGTCAGAGACGCAGTTGGCCTGCTCAACTTTTTTCTCTGCAGTAG 1920 0.401 MAFKTNLNENEKEQVPYTVEQPEVEDDDDDDEMEEEKWDEWEGDEGGSDSQFVCLFCDSNYSSSSSLFQHCASDHHFDFHSVRNSLNLDFYASFKLINYIRSQVAESRCWSCGLSCQSKHDLQNHLHDVIDFNGIKPLWDDDRYLKPFMQDDSLLCNFGEYEEVEDEQISITDEDLLRELKNIKEAYGDDLDAVKSLVANGFFRRNEATSVSDDHSNHASSSDKELINGKGSRSCVSLIGKEPEEGSLMGNPQNHIAKHIKKVNESYFGSYSSFGIHREMLSDKARMVAYGQAILKNPSLLNGAVVMDVGCGTGILSLFAAQAGASRVIAVEASAKMAEVASRVAKDNGLLLSKSQPEVNGNHKGVVEVVHGMVEEIDKIVEIQPQSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATMFVAGFGKGGTSLPFWENVCDFDMSCIGKELVTDAAQYPIVDVIDHQDLVTSSTILQNFDLATMKHNDVDFTATASLEPKLSVSENGKTNLNSKTCCWCYGVVLWFETGFTSRFCRETPAVLSTSPYTPKTHWSQTILTFHEPVAIGLGEENEGNPETIGTEVYPAVKIDLRVSIVRSTEHRSIDISMEAAGVGPDGQRRSWPAQLFSLQ 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00271 639 MobiDBLite consensus disorder prediction 20 46 - -
Car05g00271 639 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 264 591 IPR025799 GO:0016274|GO:0018216
Car05g00271 639 MobiDBLite consensus disorder prediction 1 15 - -
Car05g00271 639 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 24 637 - -
Car05g00271 639 Gene3D Vaccinia Virus protein VP39 256 425 IPR029063 -
Car05g00271 639 Gene3D - 427 634 - -
Car05g00271 639 Pfam C2H2 type zinc-finger (2 copies) 54 128 IPR041661 -
Car05g00271 639 MobiDBLite consensus disorder prediction 209 229 - -
Car05g00271 639 Pfam Methyltransferase domain 306 421 IPR041698 -
Car05g00271 639 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 24 637 IPR025799 GO:0016274|GO:0018216
Car05g00271 639 CDD AdoMet_MTases 306 424 - -
Car05g00271 639 MobiDBLite consensus disorder prediction 1 46 - -
Car05g00271 639 SUPERFAMILY beta-beta-alpha zinc fingers 34 163 IPR036236 -
Car05g00271 639 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 270 583 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00271 Car-Chr5 6562469 6569893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00271 26 638 C2H2 Transcription Factor Family AT3G12270 54.574 0.0 647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g00271 05 6562469 6569893 Car05g00271 05 6562469 6569893 ECH