Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00268 ATGGCAACTGTTGTTGCAGAAGCTTTCCTATCAGCTTTTGTAGAGGTGTTGCTGGAAAAAATAATTTCTACTGAGTTTGTGAATTTCTTTAGGAGCAAGAAGCTTGATGTTTTGCTCTTGGAAAATCTAAAATTAACATTGTTGAGTCTTCAAGCTGTACTAAATGATGCCGAGGAGAAACAAATCACCAATCCAGCTGTCAAGCAATGGCTGGATAACCTGAGGGATGTTGTCTTTGAAGCTGATGATTTGTTAGATAAAATCAATACTGAGGCATTAAGAAGCAAAGTAAATAAGGTGCGGAACATCCTTTCTTCTAGTTTCAAACAGTCTTATGGATTGATCAATTTTGATATTCAAAGATTATTTGAAAGATTGGAACGCTTTGCACGGAAAGGACACTTACTAGGATTGAAAGAAGGTGCTTCGTGTCGTGTTTGGAATGGAACTCCTACAAGTTCTGTGGTAGATGAATCTGCTATCTATGGCAGAGATTGTGACAGAAAAAAACTTAAAGAATTTTTGATGCATGCTAGGGATGATGGCAACAAAATAGGAGTGATTTCCATTGTGGGGATGGGAGGTGTGGGTAAAACGACTCTTGCTAAACTTCTTTACAATGATCCAGAAGTAAATGAGAAATTTGATTTGAAAGGGTGGGCATATATCTCGAAAGATTTTGATATTGTTCGGGTCACTAAAACCCTTTTGGAATCTGCTACTTTAGAATCAATTGATACTACCATACATACTGAATTTGTCACCTCAAGAAGAACCGATACCAGTGACCTGAATAATCTACAAGTGCAATTGCAGCAAAATTTAAATCATAAAACTTTTTTGCTAGTACTGGATGACATGTGGGATGGAAGCTATGTGGATTGGAACAATCTCAAGGACATATTTAATGTTGGGGAAATGGGAAGTAAGATCATCATCACAACACGAGATGAAAGAGTTGCACTAGCCACACAAACTTTTCTTCCTATCCACTATTTGACACCCTTGCAAAGTGATGAATGTTGGTCTTTACTTTCCAAACATGCATTTGGAGCAAGTAACTACAGGCTACAGTCCAATCTAGAAGTAATTGGGAAAGAAATTGCTAAAAAATGTGATGGTTTACCATTAGCCGCTGTAGCACTTGGGGGTCTTCTGCGCACAAAGTTGACAAGGAATGATTGGAATGATGTACTTAAGAGTAATATTTGGAATTTGCCAAATGTTGAGGTGCAACCAGTTCTTCTATCTAGCTATCATTATCTTCCTGCTCCTTTAAAAAGATGTTTGGCTTATTGCTCAATTTTTCCAAAGAATTCCATCTTAAAAAAAAATATGGTAGTTCAATTGTGGATTGCCGAAGGCTTAGTACATAAGTCCAAAAGACAGAAAAGTTGGGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGTAGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGCTAATACGTCGACGGTCTATTGATGGGGAAGAATTCTATGAAATGCACAACCTCATCAATGATTTAGCTACAATGGTTTCATCTCCGTATTGTATCAAGTTAGACGAACATGAACTAAATGATAAGGTACGCCATTTGTCATACAATAGAAAGAAATATGACTCATACAACAAATTTGATAAATTATATGGACTTAAAGGTCTACGTACCTTCTTGGCCTTGCCACTACAAGAACCGGGGTGGTTGCTCTATTCCATATCGGATAGGGTATTACGTGATTTGTTGCCAGCAATGAAACAGTTACGCGTGTTGTCGCTGTCAAACTACACGAGTATAACCGAGTTGCCCAACTCTGTTGGAAATTTGATAAGTTTGCGATACTTAAATCTCTCTAACACTGCTATTGAAAGGCTTCCATCTGTAACATGCAACCTCTACAATTTGCAGACCTTGTTGTTGTTTGGTTGTTTGTGTCTCATTGAATTGCCTGAAGAAATGGGAAAATTGGTTAATCTACGCAACCTTGACATCAGAGGTACTCAATTGAAGGAGATTCCTGTGCAAATAGCCAGACTACAAAATCTTCAAACTTTGTCTGATTTTGCTATTAGCAATCATCGTGATGGATTGAAGGCTAGAGAGTTGGGAAAATTTCCCCATCTAAAGGGAAACCTTTCCATCTCAAAGCTACAAAATATTAATGACCCCTTTGATGCTTTTGAAGCAAATTTGAAGATGAAAGAACAAATTGACAACTTGGAACTACAGTGGATTCCACATGGCAGCAATGACACTACTAGTCAAAGTTCACAAATTGAAGCTCTTGTACTTGAACAACTTCAACCTTCAACAAATTTGAAGAATCTCACCATCAAAGGTTATGGTGGAACAAGCTTTCCGAATTGGTTGGGTGATTCCTTATTTAACAACATGGTGTATTTGCACATAAGTGGTTGTGATCATTGTTCATTGCTCCCACCCGTTGGACAATTACATGGTTTGAAAAAACTCACAATTTCTAGTATGAAATCAATAAAGAGTGTTGGTTCTGAATTCTATGGAAGTGGTAGTTTTCCTTCATTTCAACCGTTTCCTTCCTTGGAGACTCTAGACTTTGAGGAGATGCCTAAGTGGGAGGAATGGAACTTGATTGGAGGTGCAGCTATAGAGTTTCCAAATCTAAGAAATTTGTCTCTGGAAACATGTCCCATACTCAAAGGAAATGTACCCCGCAACCTTCCTTCCTTAATTGCACTTGAGTTAAGGTCGTGTGATCTATTACTGGAGTCAGGGCACTCAGCAAATCAAATCATCCAATTGAAATGGTATCCTCTTAATTCTCTTCGGCAATTGACCTTAGTTGGCTTTCCCTCTCTAATGTCTTTTCCAAGACACGGTTTACCCAAAACCTTACAATCTCTCACTATCCATGATTGTGAGAATCTAGAATTCCTTCCTTGTGAGTCCTTGCCCAATTACTCACCCCTCGAGGACATAACAATATTCTATAGTTGCAACTCAATGGCATCTTTTACCTTGGGCTCTCTCCCAGTCCTAAAAAATCTTCATATATCCGGTTGTAAAAATCTCAAATCAATTTTCATTGCAGAAGAAGATGACTCCCAGAGTCTCTCATTTATTCAAAGTATCACGATATGGCATTGTGATGAGCTGGCGTCATTTTCCCTAAGTGGATTTTCCACTCCTAACCTCATTCGCTTCGAGGTATGTTGGTGTAAGAAGCTTCATTCACTTCCAGAACCAATTGACACTTTCCCTTACATTCAGGAATTAAGAATAGTTGACCTTCCAAATCTGCAACATTTTGCCAAAGAGGGTTTGCCCATCATTTTAAGAGAACTCACTGTTGGAGGGATTTTGTGCAACACAAATATAACCAAGTGGGGTTTGGAACGTCTCACTTGTCTCTCCGAGTTGCACATTTGGGGTGATGACATCATGAATGCATTCATGAAAGTGGAAGTACCATTGCTACCTGCTTCTGTCATATCCTTACACATCTCTTTATTCAAGTTGGCGGAGGAAGCGAGGGAAAGAATGGCGCAAGATTGCTTACATTCCCTGCATAGTTATCAACAACAAAATAATCACATGAGTATCCAGGTGTCATGGTTGATAGGGGACACTGGAGCTGATGATGCAGACTGA 3714 0.3772 MATVVAEAFLSAFVEVLLEKIISTEFVNFFRSKKLDVLLLENLKLTLLSLQAVLNDAEEKQITNPAVKQWLDNLRDVVFEADDLLDKINTEALRSKVNKVRNILSSSFKQSYGLINFDIQRLFERLERFARKGHLLGLKEGASCRVWNGTPTSSVVDESAIYGRDCDRKKLKEFLMHARDDGNKIGVISIVGMGGVGKTTLAKLLYNDPEVNEKFDLKGWAYISKDFDIVRVTKTLLESATLESIDTTIHTEFVTSRRTDTSDLNNLQVQLQQNLNHKTFLLVLDDMWDGSYVDWNNLKDIFNVGEMGSKIIITTRDERVALATQTFLPIHYLTPLQSDECWSLLSKHAFGASNYRLQSNLEVIGKEIAKKCDGLPLAAVALGGLLRTKLTRNDWNDVLKSNIWNLPNVEVQPVLLSSYHYLPAPLKRCLAYCSIFPKNSILKKNMVVQLWIAEGLVHKSKRQKSWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVGEEYFDELVSRSLIRRRSIDGEEFYEMHNLINDLATMVSSPYCIKLDEHELNDKVRHLSYNRKKYDSYNKFDKLYGLKGLRTFLALPLQEPGWLLYSISDRVLRDLLPAMKQLRVLSLSNYTSITELPNSVGNLISLRYLNLSNTAIERLPSVTCNLYNLQTLLLFGCLCLIELPEEMGKLVNLRNLDIRGTQLKEIPVQIARLQNLQTLSDFAISNHRDGLKARELGKFPHLKGNLSISKLQNINDPFDAFEANLKMKEQIDNLELQWIPHGSNDTTSQSSQIEALVLEQLQPSTNLKNLTIKGYGGTSFPNWLGDSLFNNMVYLHISGCDHCSLLPPVGQLHGLKKLTISSMKSIKSVGSEFYGSGSFPSFQPFPSLETLDFEEMPKWEEWNLIGGAAIEFPNLRNLSLETCPILKGNVPRNLPSLIALELRSCDLLLESGHSANQIIQLKWYPLNSLRQLTLVGFPSLMSFPRHGLPKTLQSLTIHDCENLEFLPCESLPNYSPLEDITIFYSCNSMASFTLGSLPVLKNLHISGCKNLKSIFIAEEDDSQSLSFIQSITIWHCDELASFSLSGFSTPNLIRFEVCWCKKLHSLPEPIDTFPYIQELRIVDLPNLQHFAKEGLPIILRELTVGGILCNTNITKWGLERLTCLSELHIWGDDIMNAFMKVEVPLLPASVISLHISLFKLAEEARERMAQDCLHSLHSYQQQNNHMSIQVSWLIGDTGADDAD 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00268 1237 Gene3D Ribonuclease Inhibitor 598 957 IPR032675 -
Car05g00268 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 433 IPR027417 -
Car05g00268 1237 SUPERFAMILY RNI-like 876 1186 - -
Car05g00268 1237 Gene3D - 17 117 - -
Car05g00268 1237 SUPERFAMILY L domain-like 524 1011 - -
Car05g00268 1237 Gene3D - 148 327 IPR027417 -
Car05g00268 1237 PANTHER DISEASE RESISTANCE PROTEIN RP 21 1002 IPR044974 GO:0006952
Car05g00268 1237 Gene3D Ribonuclease Inhibitor 984 1137 IPR032675 -
Car05g00268 1237 PRINTS Disease resistance protein signature 372 386 - -
Car05g00268 1237 PRINTS Disease resistance protein signature 187 202 - -
Car05g00268 1237 PRINTS Disease resistance protein signature 926 942 - -
Car05g00268 1237 PRINTS Disease resistance protein signature 274 288 - -
Car05g00268 1237 Coils Coil 40 60 - -
Car05g00268 1237 Gene3D - 335 418 IPR042197 -
Car05g00268 1237 Gene3D - 419 540 IPR036388 -
Car05g00268 1237 PANTHER OS05G0414200 PROTEIN 21 1002 - -
Car05g00268 1237 SMART LRR_typ_2 684 707 IPR003591 -
Car05g00268 1237 SMART LRR_typ_2 637 660 IPR003591 -
Car05g00268 1237 Pfam Rx N-terminal domain 9 101 IPR041118 -
Car05g00268 1237 Pfam NB-ARC domain 169 400 IPR002182 GO:0043531
Car05g00268 1237 Coils Coil 502 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00268 Car-Chr5 6519401 6524235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00268 625 713 WRKY Transcription Factor Family AT4G12020 37.778 3.80e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00268 - - vun:114184488 1229.54