Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00265 ATGGATACTATTGCTAGTGTAGCGTCAAGCGTGGCTTTACCTGTGCTGCGGCAATTTACTTATATATTGATGTACAACAGTTACCTCCATGATCTCGAGAATGAGATTCAGAAGCTGCAGAGGGAGGAGAAAGAAATGAGGCACACTGTTGAAGCTGCCAAAAGGAACGGTGAAGAGATCGAAGACACGGTTCGTGACTGGTTTTCTAGAGTGCAGACAGCCATAGAAGAGGCACAGGCATTCCTTCGTGAAGAAGACCAAGAAAGAGTTGGATGCGTAGATGCGGTGTACTCAAGGTACACAAGGAGTCAGAAAGCAAGAAGCTTGGTGGATCTTTTGATTGAAATAAAAAAAGAAACATTCGACCGGATTTCATACCGTTGTGCTTTGAAATGCAACTTCAGTTCTGGTGCTAGAGGTTATGTGGACTTGGAATCAAGAACAACAATGTTGAACGAAATTCTTCGTGTGTTAAAAGAGGATTCTGATGTTCACATGATTGGTGTGTATGGAATGGCAGGGATAGGTAAGACTGCATTGGTGAAGGAACTAGCGTGGCAAGCCGAGAAAGATGGTTTGTTCGATGTGGTAGTGTTGGCTACTGTGACGAATTCTCCTAACGTGACAAAGATTCGAGCTGAAATAGCTGATGGGTTAGGTTTGAAGTTTGATGAGCTGACTGAGGTGGGAAGAGCGAGCCGGTTACGCCAAAGGATTAGGCAGGAGATAAAGATTCTTGTGATACTCGATGATGTTTGGGGAGAGCTAAGCTTGAATGAGGTCGGTGTTCCTTTCAGCGATGATCGTGGTGGTTGCAAAGTGTTGGTTGCATCTAGAGATCGTAATGTGTTGACTACTAACTTAGGTGCAAAGAAAGTTTATAGACTTGAAGTTTTGTCTGAGGATGAGAGTTGGAGTTTGTTTGAAAATAGAGGAGGGAATGCTGTTGAAGATGTTAGCATTAAGCCGGTAGCGATGAAAGTGTCGAAAAATTGTGCTGGTTTACCCCTTTTGATTGTTAATGTTGTTGAAGCATTGAAGAACAAGGATTTGTATGCTTGGAAAGATGCACTTGAACAGATAGAAAATTTTGACTTTGATGGATGTTTTTATTCTCAAGTTCATTCTTCTATTGAGAAGAGTTATGATCATTTAGAAAGTCAAGAACTCAAAACATTCTTCCTTCTTTTAGGTTCAATGGGAAATAGTTACAACGCGAAAGACTTGTTGGTGTTCGGTTGGTGTTTAGGTTTGCATAAACACGTTGATACGTTGACAGACGGAAGAAACGGGCTTCACAAATTGATCGACGACTTGAGAGATGCGTGTTTGTTGCTCGAAGGCGGAAGAGATTCGGTTGCGGCACTCAAAGTTGTTCGCATTGTGGCTGCCTCCATCGCGTCAAAGCTCAAGCCGTTCTTTACTGTCGAGAGAAACACCCAACTGAAAGAATGGCCGAGAACCGATTTCTTGAAAACATGTCATCATATTTTCTTGGATCGGTGTCGCATCCACGAACTTCCCGAGAGGTTAGAATGTCCTAACTTAAAGATACTCAAACTCAACTCTCAAGATAATAACAATTTGAAAGTTCATGATAATTTCTTTGATCATATGAAAGAACTTAAGATACTAAGTTTAGGAAATTTGAATTTTACTCCATCACTTCCTTCATCTATTTCCCTTTTAACAAACCTCCAAGCACTTAATCTCAATAAATGCATGTTGCAAGACATTTCTATTGTTGGAGAAATCAAAAGTTTAGAGATTCTCAACCTGGAAAAATCCGAGCTTAAAGAGATCCCTGCCGAAATAGGACGATTGACTAATCTTCGGTTGCTAGATTTGACCGATTGCTCGACGCTAGAAATAGTACCTCGCAATCTCATATCAAGTCTCACAAGCTTAGAAGAACTCAATATCGGAAACTGTAATAATATTCAATGGGAGGTTATGGCTACTGGAATTGAAAACCAGAAAAATAATTCAAGTTTAAGCGAGTTAAGAAATTTGCATCAACTTTCAACTTTGAATATGCAAATAAATGATACTTCAGTTTTTCCTAGAGACTTATTTTCCTTTGGAAGACTAGAAAGTTACAAGATTTTGATTGGTGATGGCTGGAAATTTTCTGAGGAGGAGGATTCTGAGAACTACAAAAGTTCAACAAGAGTTCTTAAGCTAAATTTGAGCATGGATCCAAGCATGCTTTTGGATTATGGAATAAAAATGTTGACGGCTCGCGCCGAAGATTTGTATCTAGCTGAACTAAAAGGTGTCAAAGAAGTACTTTATGAATTGAATGATGAAGGATTTTCACATTTGAAGCATCTTAGTATTAAAAAATGTGATGAAATGGAGAGCATTATTGGATCAACAAATTGGTCACTTCATGATAATGTTTTCATCAACTTGGAATCTTTGATACTTCACAATATGATGAAATTGGAGAGAATATGCAGTGATCCAATTCCAACAGAAGCTTTTGCAAAACTACAAGTTATCAAAGTGAAAAACTGTGATAGGATGGAGTTTGTTTTGTTGAATTCAATGGTCAAACACCTTTCTGAGCTTGTTGAAATTGAGATTTCTGAATGTGGATTTATGAAGTATATCATTGACAAACAAAGACAAGAGGATGATGGAGAAAGTGACAAGATCGCGCTCCCGAAAATGCGTTCGCTCACGCTTGAATCGTTACCTTCTCTTGTTAGTCTTTCTCCTGAGTCATGCATTAAGGATAATGAAAACAACAATGATTTCTCAAGCCAACTTTTGAATGATAAGGTTGAATTTCCAAATTTGGAGAACTTGAAGCTTTGCTCAATCAATGTCCAGAGAATATGGGATGACAAACTTTCAGCAGATTCTTGTTTCAAAAATTTGACCAAATTGACTGTAGATGGTTGTGAAAAGTTGGCATATCTTTTTTCATACTCAGTGGCTGAAAGATTGGTCAAACTTGAACATCTTTTAATTAATTCATGCAAATTGGTAGAGAAGATATTTGTCCCTCATGAAATTTTGAGTAACTTTGCTCATATTATAAAATCTCCTCCTCTTGAAATGGTTCCAATTTTCCCAAACTTGGAGACATTAGTGATTTCTCAAATGGACAACTTGAAGTCAATATGGCCAAACCAACTTCCTCAAAATTCCTTTGGCAAATTAAAAAAATTGGAAATCACATCATGTGACCAACTTTTGAATGTGTTCCCAAGTCATGTGCAAAACAAATTACAAAGCATTGAATCATTGAATTTATTGCACTGTCCTGCACTACAAGTTATATATGAAATAGATGATATTAGAGAGGAAGAGCTTAAAATTCCACTAAGAACTTTATCTTTAGGACATTTACCAAACCTAAAGTATTTGTGGAATAAGGATCCACAAGGAAATATCAAGTTTCATAACTTGTTTGTGGTAAAAGCAGAAAAATGTGAAAGTCTAAAACATTTATTTCCATTCTCTGTGGCCAAAGATCTTTTGCAACTACAAGTCCTTGAGATAAGTGATTGTGGTGTAGAGGAAATTATTGCAAAGGATCATCAAGGAGAGGTAGAGGAATGTGTTGGACTTGTTTTTCCAAGATTAGTTTCTTTGAAATTTTTGAATTTGAAAGAACTTAAATGCTTTTGTAGTGGAAATCATAACTTTAGGTTTCCATATTTGAATAAATTATATGTGGTTGAGTGTCCTATAATGGAGACTTTCTCTCATGGAATCTTGAGAGCATCAATTCTTAGAAAAATATGTGTGAGTGAGAAAGGAGATCTATTGTATTGGGAAGGTGACCTTAATACTACAATAAGAAATCTTTTTCGTAGGGGAATGGATCTTCTCCTGTGA 3852 0.3736 MDTIASVASSVALPVLRQFTYILMYNSYLHDLENEIQKLQREEKEMRHTVEAAKRNGEEIEDTVRDWFSRVQTAIEEAQAFLREEDQERVGCVDAVYSRYTRSQKARSLVDLLIEIKKETFDRISYRCALKCNFSSGARGYVDLESRTTMLNEILRVLKEDSDVHMIGVYGMAGIGKTALVKELAWQAEKDGLFDVVVLATVTNSPNVTKIRAEIADGLGLKFDELTEVGRASRLRQRIRQEIKILVILDDVWGELSLNEVGVPFSDDRGGCKVLVASRDRNVLTTNLGAKKVYRLEVLSEDESWSLFENRGGNAVEDVSIKPVAMKVSKNCAGLPLLIVNVVEALKNKDLYAWKDALEQIENFDFDGCFYSQVHSSIEKSYDHLESQELKTFFLLLGSMGNSYNAKDLLVFGWCLGLHKHVDTLTDGRNGLHKLIDDLRDACLLLEGGRDSVAALKVVRIVAASIASKLKPFFTVERNTQLKEWPRTDFLKTCHHIFLDRCRIHELPERLECPNLKILKLNSQDNNNLKVHDNFFDHMKELKILSLGNLNFTPSLPSSISLLTNLQALNLNKCMLQDISIVGEIKSLEILNLEKSELKEIPAEIGRLTNLRLLDLTDCSTLEIVPRNLISSLTSLEELNIGNCNNIQWEVMATGIENQKNNSSLSELRNLHQLSTLNMQINDTSVFPRDLFSFGRLESYKILIGDGWKFSEEEDSENYKSSTRVLKLNLSMDPSMLLDYGIKMLTARAEDLYLAELKGVKEVLYELNDEGFSHLKHLSIKKCDEMESIIGSTNWSLHDNVFINLESLILHNMMKLERICSDPIPTEAFAKLQVIKVKNCDRMEFVLLNSMVKHLSELVEIEISECGFMKYIIDKQRQEDDGESDKIALPKMRSLTLESLPSLVSLSPESCIKDNENNNDFSSQLLNDKVEFPNLENLKLCSINVQRIWDDKLSADSCFKNLTKLTVDGCEKLAYLFSYSVAERLVKLEHLLINSCKLVEKIFVPHEILSNFAHIIKSPPLEMVPIFPNLETLVISQMDNLKSIWPNQLPQNSFGKLKKLEITSCDQLLNVFPSHVQNKLQSIESLNLLHCPALQVIYEIDDIREEELKIPLRTLSLGHLPNLKYLWNKDPQGNIKFHNLFVVKAEKCESLKHLFPFSVAKDLLQLQVLEISDCGVEEIIAKDHQGEVEECVGLVFPRLVSLKFLNLKELKCFCSGNHNFRFPYLNKLYVVECPIMETFSHGILRASILRKICVSEKGDLLYWEGDLNTTIRNLFRRGMDLLL 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00265 1283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 396 IPR027417 -
Car05g00265 1283 Gene3D - 129 293 IPR027417 -
Car05g00265 1283 SUPERFAMILY RNI-like 1020 1238 - -
Car05g00265 1283 SMART AAA_5 163 302 IPR003593 -
Car05g00265 1283 Coils Coil 22 56 - -
Car05g00265 1283 PRINTS Disease resistance protein signature 166 181 - -
Car05g00265 1283 PRINTS Disease resistance protein signature 239 253 - -
Car05g00265 1283 PRINTS Disease resistance protein signature 332 346 - -
Car05g00265 1283 PRINTS Disease resistance protein signature 606 622 - -
Car05g00265 1283 Gene3D Ribonuclease Inhibitor 708 1014 IPR032675 -
Car05g00265 1283 Gene3D Ribonuclease Inhibitor 1015 1256 IPR032675 -
Car05g00265 1283 SUPERFAMILY L domain-like 491 1092 - -
Car05g00265 1283 Gene3D - 298 386 IPR042197 -
Car05g00265 1283 PANTHER - 1 1252 - -
Car05g00265 1283 CDD AAA 150 278 - -
Car05g00265 1283 Pfam NB-ARC domain 148 369 IPR002182 GO:0043531
Car05g00265 1283 PANTHER DISEASE RESISTANCE PROTEIN (CC-NBS-LRR CLASS) FAMILY PROTEIN 1 1252 - -
Car05g00265 1283 Gene3D Ribonuclease Inhibitor 467 704 IPR032675 -
Car05g00265 1283 SUPERFAMILY RNI-like 769 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00265 Car-Chr5 6465074 6474067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00265 159 626 WRKY Transcription Factor Family AT5G45050 24.521 7.86e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00265 - - gmx:100814903 1731.46