Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00252 atggcttcttattCGAGTCTTAATATATCAGATGCCCGATTTGGCGTGACATCCCAATTTTACACCTTGTTTAGGAACTTCAGCGTTCTTGAGACTACTTTGGATTCAAAGGATCATTATGTTGTGAAGGAATATTCCATCCACATTGATGGAGGTACATTGAACGTAACTTTTACTCCATCTACCACTGCAATTAATGCATATGCTTTCATCACATTTTGTCGCCGTAGGCATAACACAAGTGAGGGACGACCTAGCTGGTTTCGACTTTCGCTTTTCAGTAATTCACCCTCTCCAGCTTCTGCCAATATCAACACAACAAGGAGTTACAGATCCTCACTTCCACAAAACCTTTGTCGTCATTTCTCGTTTGCGGAAATGAAGGCTGCTACAAACAACTTTGACGAGACTTTGATTCTCGGTGTGGGAGGATTTGGCAAGGTTTACAAAGGAGAAATTGACGGTGGATCGACTAAAGTCGTAATTAAACGTGCGAATCCACTCTCCAAACAGGGTGAGCACGAATTCCAAACTGAAATTCAAATGCTCTCTAAACTTCGTCACCGCCACCTTGTTTCGCTGATTGGATACTGTGAAGAGAACACTGAAATGATCCTTGTCTATGATCACATGGCCTATGGAACACTCAGGGAGCATCTAGATAAGACACAAAAACCTCCACTACCGTGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCAGGGTTTGCACTATCTTCACACCGGCGTTGAACGCACTATCATCCACCGTGACGTGAAGACAACAAACATTTTACTAGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTCGGATTGTCGAAAATATATCCTTCATTGGATAATACACATGTAACTACTGAGGTAAAGGGTAGTTTCTGGTACTTGGATCCAGAATACTACAGGAGGCAGCAACTGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTCTATTTGAGATACTCTGCGCTCGCCCGGCTTTGAATGTAAAACTAGCTGACGAGGAAATGAATCTAGAAGTTCGCCGAGACCGCGATCACATGGCCTATGGAACACTCAGGGAGCATCTAGATAAGACACAAAAACCTCCACTACCGTGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCAGGGTTTGCACTATCTTCACACCGGCGCTGAACGCACTATCATCCACCGTGACGTGAAGACAACAAACATTTTACTAGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTCGGATTGTCGAAAATATATCCTTCATTGGATAATACACATGTAACTACTGAGGTAAAGGGTAGTTTCTGGTACTTGGATCCAGAATACTACAGGAGGCAGCAACTGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTCTATTTGAGATACTCTGCGCTCGCCCGGCTTTGAATGTAAAACTAGCTGACGAGGAAATGAATCTAGGTAAATGGGCAGCTCATTGCTACAAAACAGGCATTCTTGACCAAATCAGTGATCCTTATCTGAAGGGCAAGATAGCTCTGAAATGCTTTAAGAAGTTCGCCGAGACCGCGATGAAGTGTGTAGCTGACCAAGGCATTGAAAGGCCATCCATGGGGGATGTCTTGTGGAACCTGGAACTTGCTTTGCAGCTTCAGAAAAGTTTAGAAGACACTGCAAATCCAGAAGATAATGCAAATCTAGAAGATAGTGAAAACAGTCTTGGTGGAATACACTGCGAAGAGCCATTGTTTACAGATGTGAAAGGAAAGAAGAAGTTGGATTATGTGATTGATTCTGGAAACAGTGGCGATTCAACGAGTGTTAGAGGTAGAAGCTTGGCTAGAGAAGATTCTGCTCAGGGCTATTATGTTGCTCTTGATTATGAAGCTGGGCTATTAAAAGAAAACACACAAGCATCATTTCAAGCTGCAGGAGATGGATGGTTTACACTTTTAAAAGAGAGGTTTCAGACGGCAGAGATTTTATTCAAGCCACATATTGCTGGAATGCAAGCCATGGGTTTGCACCAGGCCATAGCTGTTTGTATGGAGCATTGTCATTCTGCAGAACTAACGGGCGACTGTGATTGGTACAAGATGGTAGTTTTATCGAGAGGAACTGCATGTTTGCCAAGTTTAGCAAACGGTGATTGGTACAAGACGGTAGTTTTATCGGGAGGAACTGCATGTTTGCCAGGTTTAGCAGATGTTAGGCGGAAAGTGTTTACTGCGTGCAAACGCATGCTTTTCCTACAACAGGTATTTTGGATCCTTATTTCTATCTGA 2301 0.4333 MASYSSLNISDARFGVTSQFYTLFRNFSVLETTLDSKDHYVVKEYSIHIDGGTLNVTFTPSTTAINAYAFITFCRRRHNTSEGRPSWFRLSLFSNSPSPASANINTTRSYRSSLPQNLCRHFSFAEMKAATNNFDETLILGVGGFGKVYKGEIDGGSTKVVIKRANPLSKQGEHEFQTEIQMLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLDKTQKPPLPWKQRLEICIGAAQGLHYLHTGVERTIIHRDVKTTNILLDEKWVAKVSDFGLSKIYPSLDNTHVTTEVKGSFWYLDPEYYRRQQLTDKSDVYSFGVVLFEILCARPALNVKLADEEMNLEVRRDRDHMAYGTLREHLDKTQKPPLPWKQRLEICIGAAQGLHYLHTGAERTIIHRDVKTTNILLDEKWVAKVSDFGLSKIYPSLDNTHVTTEVKGSFWYLDPEYYRRQQLTDKSDVYSFGVVLFEILCARPALNVKLADEEMNLGKWAAHCYKTGILDQISDPYLKGKIALKCFKKFAETAMKCVADQGIERPSMGDVLWNLELALQLQKSLEDTANPEDNANLEDSENSLGGIHCEEPLFTDVKGKKKLDYVIDSGNSGDSTSVRGRSLAREDSAQGYYVALDYEAGLLKENTQASFQAAGDGWFTLLKERFQTAEILFKPHIAGMQAMGLHQAIAVCMEHCHSAELTGDCDWYKMVVLSRGTACLPSLANGDWYKTVVLSGGTACLPGLADVRRKVFTACKRMLFLQQVFWILISI 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00252 766 Gene3D Actin; Chain A, domain 4 616 674 - -
Car05g00252 766 Gene3D - 676 719 - -
Car05g00252 766 SUPERFAMILY Protein kinase-like (PK-like) 104 335 IPR011009 -
Car05g00252 766 Gene3D Phosphorylase Kinase; domain 1 96 210 - -
Car05g00252 766 SUPERFAMILY Actin-like ATPase domain 620 750 IPR043129 -
Car05g00252 766 PANTHER OS07G0166700 PROTEIN 354 577 IPR045272 GO:0004714|GO:0006468
Car05g00252 766 PANTHER OS07G0166700 PROTEIN 64 347 IPR045272 GO:0004714|GO:0006468
Car05g00252 766 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 354 577 - -
Car05g00252 766 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 64 347 - -
Car05g00252 766 Gene3D Transferase(Phosphotransferase) domain 1 356 578 - -
Car05g00252 766 Gene3D Transferase(Phosphotransferase) domain 1 211 353 - -
Car05g00252 766 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Car05g00252 766 SUPERFAMILY Protein kinase-like (PK-like) 354 551 IPR011009 -
Car05g00252 766 SMART serkin_6 134 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00252 766 ProSiteProfiles Protein kinase domain profile. 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00252 766 Pfam Protein tyrosine and serine/threonine kinase 355 547 IPR001245 GO:0004672|GO:0006468
Car05g00252 766 Pfam Protein tyrosine and serine/threonine kinase 139 334 IPR001245 GO:0004672|GO:0006468
Car05g00252 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00252 Car-Chr5 5836095 5839874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00252 3 71 Receptor kinase-like Gene Family AT3G51550 42.029 3.54e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car05g00252 PK_Tyr_Ser-Thr 4.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00252 - - cam:101501283 786.949