Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00250 atgaaggtcattctcgcctccctaggcttattcttgtcagagtttttaaccaatcttgtgcacgtccaaGTTCGAGAGCCTGCTCATTCAAATTACACAGATCCATTGACAACCCTAAATTATACATCAGATTACACCTGGTGGTTCTCTGATAAAAGAAGTTGCAGACAAATACCTGAAATTTTGTTAAGCCATAGAAGCAACGAAAACCTTCGACTGTTTGAAATAGATGAGGGGAAGAGATGTTACAATTTGCCAACAATTAAGGATCAAGTGTATTTGATAAGGGGCACGTTTCCATTTGATAGTTTAAATTCTTCCTTTTATGTTTCAATTGGGGTAACACAACTAGGTGAAGTACGATCGTCTAGGCTCGAGGACTTGGAAATTGAGGGAGTTTTCAGAGCCACCAAAGACTACATAGACTTCTGCTTATTGAAGGAAGAGGTCAATCCCTTCATTTCTCAGCTTGAATTAAGGCCATTACCTGAAGAATACCTACATGGTTTCTCTACCGGTGTTCTAAAACTGATAAGCAGAAATAATCTTTGTGGCACAAAAGATGACATCAGGTTCCCAGTTGACCAAAATGATAGAATCTGGAAAGCAACTTCAAGTCCATCATCTGCTCTTCCACTGTCATTCAATGTCAGCAATGTTGAGCTCAAAGGCAATGTGACACCTCCTTTACAAGTCTTACAAACAGCTCTTAATCACTCTGAGCGATTGGAGTTTGTCCACGATGGGCTTGAGACAGAGGATTATGAATACTCGGTGTTTCTCTACTTCCTTGAATTAGATAGCACTCTCAAAGAAGGCCAAAGGGTGTTTGACATCTATCTAAATAATGAGATTAAAAAGGAGAGGTTTGATGTATTGGATGGAGGGTCCAAATACAGTTACACAGTCTTGAACATTTCAGCGAAAGGATCGCTCAATATAACCTTGGTCAAGGCATCTGGATCTAACTTTGGACCCCTTTTGAATGCCTATGAGATCCTACAGGCACGATCGTGGATTGAAGAGACCAACCAAACAGATGTGGAAGTTATTCAGAAGATAAGAGAAAAACTGCTGCTACAAAACCAAGACAATGGAGCATTTGAGAGTTGGACTGGAGATCCTTGTATGCTTTTCCCCTGGAAAGGTATAGCATGTGATGGTTCAAATGGTTCATCTCTTATCACTAAGTTGGATCTTTCCTCCAATAATCTCAGAGGAACAATTCCGTCCAGTGTCACTGAGTTGACCAATTTACAAATATTGAACCTGAGCCACAACCATTTTGATGGTTATATTCCCTTGTTTCCACCATCTTCCTCGTTGACATCAGTAGACCTGAGCTACAATGATCTTTCAGGACAGCTTCCGGAGTCCATTATCTCACTGCCGCATTTAAAATCATTATATTTTGGCTGCAATCAACCCATGAGCGATGAAGATACAGCAAAGTTGAACAGTTCACTAATCAATACAGATTATGGAAGATGCAAAGCAAAAAAACCCAAATTTGGACAAGTTTTGGTGATTGGAGCTATTATTACAAGTGGATCACTTTTGCTTACTTTCGCTGTTGGAATTCTTTTTTTTTGCCGTTATAGACACAAGTCAATTCCTTTGGAAGGATTTGGTGGAAAGACCTACCCAATGGCAACAAATGTAATTTTCTCTTTGCCAAGCAAAGACGATTTCTTCATAAAGTCGGTCTCAGTTAAACCATTCACTTTGGAGTTTCTAGAGCTGGCAACAGTGAGGTACAAAACTTTGATAGGTGAAGGAGGTTTTGGCTCTGTTTACCGGGGCACTCTAGACGATGGTCAGGAAGTGGCAGTAAAAGTCCGTTCAGCAACATCAACTCAGGGAACCCGAGAATTTGATAATGAGCTAAACCTACTTTCAGCAATACAACATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAATGGCTCTTTGCTAGATAGACTATATGGGGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTAGGTGCAGCTCGAGCAGGTTTGGCATATCTTCACACATTTCATGGACGTTCTGTAATACACAGGGACGTAAAATCGAGCAATATACTTCTGGATCATAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACCGCAGGGTATCTGGATCCTGAGTACTACAAAACTCAGCAACTATCTGAAAAGAGTGATGTTTTCAGCTTTGGCGTGGTTCTACTTGAAATTGTAAGCGGCCGAGAACCTCTAAACATAAAGAGACCACGGATTGAATGGAGCTTGGTTGAATGGGCCAAACCATACATAAGAGCATCAAAGGTGGAAGAAATTGTAGATCCTGGGATCAAGGGAGGATATCATGCAGAGGCATTATGGAGAGTGGTGGAAGTAGCACTGCAATGTCTTGAACCCTTCTCAGCATATAGGCCGTGTATGGTTGATATAGTTCGCGAGTTGGAGGATGCTCTCATCATCGAAAACAATGCATCTGAATACATGAAGTCAATCGACAGCCTTGGAGGATCCAACCGCTAA 2649 0.399 MKVILASLGLFLSEFLTNLVHVQVREPAHSNYTDPLTTLNYTSDYTWWFSDKRSCRQIPEILLSHRSNENLRLFEIDEGKRCYNLPTIKDQVYLIRGTFPFDSLNSSFYVSIGVTQLGEVRSSRLEDLEIEGVFRATKDYIDFCLLKEEVNPFISQLELRPLPEEYLHGFSTGVLKLISRNNLCGTKDDIRFPVDQNDRIWKATSSPSSALPLSFNVSNVELKGNVTPPLQVLQTALNHSERLEFVHDGLETEDYEYSVFLYFLELDSTLKEGQRVFDIYLNNEIKKERFDVLDGGSKYSYTVLNISAKGSLNITLVKASGSNFGPLLNAYEILQARSWIEETNQTDVEVIQKIREKLLLQNQDNGAFESWTGDPCMLFPWKGIACDGSNGSSLITKLDLSSNNLRGTIPSSVTELTNLQILNLSHNHFDGYIPLFPPSSSLTSVDLSYNDLSGQLPESIISLPHLKSLYFGCNQPMSDEDTAKLNSSLINTDYGRCKAKKPKFGQVLVIGAIITSGSLLLTFAVGILFFCRYRHKSIPLEGFGGKTYPMATNVIFSLPSKDDFFIKSVSVKPFTLEFLELATVRYKTLIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARAGLAYLHTFHGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVEEIVDPGIKGGYHAEALWRVVEVALQCLEPFSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00250 882 CDD STKc_IRAK 590 858 - -
Car05g00250 882 Gene3D Transferase(Phosphotransferase) domain 1 661 876 - -
Car05g00250 882 SUPERFAMILY Protein kinase-like (PK-like) 566 857 IPR011009 -
Car05g00250 882 Pfam Protein tyrosine and serine/threonine kinase 586 857 IPR001245 GO:0004672|GO:0006468
Car05g00250 882 ProSitePatterns Protein kinases ATP-binding region signature. 590 612 IPR017441 GO:0005524
Car05g00250 882 ProSiteProfiles Protein kinase domain profile. 584 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00250 882 Gene3D - 180 338 - -
Car05g00250 882 PRINTS Leucine-rich repeat signature 416 429 - -
Car05g00250 882 PRINTS Leucine-rich repeat signature 395 408 - -
Car05g00250 882 SMART serkin_6 584 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00250 882 PANTHER OS05G0525400 PROTEIN 52 875 - -
Car05g00250 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Car05g00250 882 Pfam Malectin-like domain 28 334 IPR024788 -
Car05g00250 882 SUPERFAMILY L domain-like 363 477 - -
Car05g00250 882 Pfam Leucine Rich repeat 439 454 IPR001611 GO:0005515
Car05g00250 882 Gene3D Ribonuclease Inhibitor 344 497 IPR032675 -
Car05g00250 882 PANTHER OS07G0107800 PROTEIN-RELATED 52 875 - -
Car05g00250 882 Gene3D Phosphorylase Kinase; domain 1 590 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00250 Car-Chr5 5806188 5812976 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00250 5 864 Receptor kinase-like Gene Family AT1G67720 34.298 6.89e-130 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car05g00250 Malectin_like 2.1e-45 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00250 - - gmx:100781986 1371.68