Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g00248 ATGCTCTCTAAACTTCGTCACCGCCACCTTGTTTCGTTGATTGGATACTGTGAAGAGAACACTGAAATGATCCTTGTCTATGATCACATGGCATATGGAACACTCAGAGAGCATCTAGACAAGACACAGAAACCTCCACTACCGTGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCAGGGTTTGCACTATCTTCACACCGGCGCTGAACGCACTATCATCCACCGTGACGTGAAAACAACAAACATTTTACTAGATGAGAAGTGGGTGGCCAAGGTTTCTGATTTCGGATTGTCGAAAACATATCCTTCATTGGATAATACACATGTAACTACTGAGGTAAAAGGTAGTTTCGGGTACTTGGATCCGGAATACTACAAGAGGCAGCAACTGACCGACAAATCCGATGTGTACTCATTTGGTGTGGTTCTATTTGAGATACTATGCGCTCGCCCGGCTTTGAACGTAAAACTAGCTTACGAGGAAATGAATCTAGGTAAATGGGCAGCTCATTGCTACAAAACAGGCATTCTTGACCAAATCAGCGATCCTTATCTGAAGGGCAAGATAGCTCCGGAATGCTTTAAGAAGTTCTCCGAGACCGCGATGAAGTGCGTATCTGACCAAGGCATTGAAAGGCCATCCATGGGGGATGTCTTGTGGAACCTGGAACTTGCTTTGCAGCTTCAGAAAAGTTCAGAAGACACTGCAAATCCAGAAGATAATGCAAATCCAGAAGATAGTGGAAACAGTCTTGGCGGAATACACTGCGAAGAGCCATTGTTTACAGATGTGAAAGGAAAGAAGAAGTTGGATTATGTGACTGATTCTGGAAAATGTGGCGATTCAACGAGTGTTGGAGGTAGAAGCTTGGCTAGAGAAGATTCTCCTCAGGGCTATTATGTTGCTCTTGATTATGAAGCTGAGCTATTAAAAGAGAACACACAAGCATCATTTCAAGCTGCAGGAGATGGATGGTTTACACTTTCAAAAGAGAGGTTTCAGACGGCAGAGATTTTATTCAAGCCACATATTGCTGGAATGCAAGCCATGGGTTTGCACCAGGCCATAGCTGTTTGTATGGAGCATTGTCATTCTGCAGAACTAACGGGCGACTGTGATTGGTACAAGATGGTAGTTTTATCGGGAGGAACTGCATGTTTGCCAAGTTTAGCAAACGGTGATTGGTACAAGACGGTAGTTTTATCGGGAGGAACTGCATGTTTGCCAGGTTTAGCAGAAAGATTAGAGAAGGAACTCCATGCATTACTTCCTCCATACATGTCACATGGAAGTGAAGTTGTTAGATGA 1314 0.4399 MLSKLRHRHLVSLIGYCEENTEMILVYDHMAYGTLREHLDKTQKPPLPWKQRLEICIGAAQGLHYLHTGAERTIIHRDVKTTNILLDEKWVAKVSDFGLSKTYPSLDNTHVTTEVKGSFGYLDPEYYKRQQLTDKSDVYSFGVVLFEILCARPALNVKLAYEEMNLGKWAAHCYKTGILDQISDPYLKGKIAPECFKKFSETAMKCVSDQGIERPSMGDVLWNLELALQLQKSSEDTANPEDNANPEDSGNSLGGIHCEEPLFTDVKGKKKLDYVTDSGKCGDSTSVGGRSLAREDSPQGYYVALDYEAELLKENTQASFQAAGDGWFTLSKERFQTAEILFKPHIAGMQAMGLHQAIAVCMEHCHSAELTGDCDWYKMVVLSGGTACLPSLANGDWYKTVVLSGGTACLPGLAERLEKELHALLPPYMSHGSEVVR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g00248 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Car05g00248 437 MobiDBLite consensus disorder prediction 233 250 - -
Car05g00248 437 Gene3D Transferase(Phosphotransferase) domain 1 31 250 - -
Car05g00248 437 SUPERFAMILY Actin-like ATPase domain 298 430 IPR043129 -
Car05g00248 437 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00248 437 PANTHER OS07G0166700 PROTEIN 1 240 IPR045272 GO:0004714|GO:0006468
Car05g00248 437 Pfam Protein tyrosine and serine/threonine kinase 1 221 IPR001245 GO:0004672|GO:0006468
Car05g00248 437 Gene3D - 350 393 - -
Car05g00248 437 Gene3D - 394 435 - -
Car05g00248 437 MobiDBLite consensus disorder prediction 233 254 - -
Car05g00248 437 Gene3D Actin; Chain A, domain 4 292 348 - -
Car05g00248 437 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 1 240 - -
Car05g00248 437 SUPERFAMILY Protein kinase-like (PK-like) 1 225 IPR011009 -
Car05g00248 437 SMART serkin_6 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g00248 437 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g00248 Car-Chr5 5791052 5794464 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g00248 1 297 Receptor kinase-like Gene Family AT3G51550 71.803 3.20e-147 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car05g00248 PK_Tyr_Ser-Thr 3.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g00248 - - cam:101501283 814.683